Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0458 ATGCTCCGAAGTCCGAACAAAACACTATCTTTTACCTTGTCTCGAATCCTGACTGTTCACATTCTGATTGACTCCAGAAAAGCCTTCGATCTTGATATGGTAGTGTTGTGGGTTTGCGTGGTTAATATGAGCAATTGGTTGGGTTTCTGTTCGACTGCACACTTGAGGAATATTGATGCAAGGTTTGGAAGAGAAAACCAAGACCATGGTGGAACCTTTCCTCCTACTCCTCCTCCTCCTCACTTGTCTATCCCCTTGCGCTCTGATGGCTCTCTCTGTGTTGCTGAAGCTTTTAGGCACTCTGCAGTAGTTGAAGAATGGACATATGATAATGCAATATCTGGAGGAAACTCAAATGAAGAAGGTCCGAAGCTTGAAGATTTCTTGGGTTGTTGTTACTCAAACTCTCCCCTCGCTGAAACCAAAGTCTACTGCCAACAGGACAGAAACCAAATTCCGAACATTAATATTTCCAAAATCAATGTTAATGTAGCCCCGAGCTTCAATTCCAACACAGAGACAGAAACTGGCAAGAATCTCACAAACCCTTCTTCCTTACTCCAATCTTTCCATCATGCATACGGTGATGACCCTCAATCTCAAGACCCAATTCCCAGCAATGGCATGTACAAGTCTTTGCTGAACCAAACTCACTTCTCTAATGGAAAACCTTCTGCTGAAGCTAATGGGTGTAATTTTCATCAATCTCTGTCTTTAACTATGAGCCCTGGTGTATATATTGGGGTGGGTGCAATTTCCCCAGTTCAAGTGGATGATGATTCTCGCAAACGATCTTTGGATAAATCTCTTGCTAGAGAATCAATACCTCGCAAATCCATTGATACTTTTGGGCAGAGAACATCTCAATACCGTGGTGTTACAAGGCATAGATGGACTGGGAGATATGAGGCCCATTTGTGGGATAATAGTTGCAGAAAAGAAGGGCAAACAAGGAAAGGAAGGCAAGGCTATAACCACTCTCCATTTGGTGGTGTGTTAAATGCACAGTCAAGCACTTACGAGAAGGAGCTTGAAGAGACGAAGCACATGACAAGGCAAGAATTTGTGGCCAATTTGAGAAGGAAGAGCAGCACGCAAGAAGAAGCCGCTGAAGCATATGATATAGCAGCGATAAAGTTCAGAGGGACAAGTGCAGTGACCAACTTCGATATAAGTAGGTACGATGTGAAAAGGATTTGCTCAAGCTCCACTCTAATTGGAGGTGACCTTGCTAAACGTTCTCCTAAGGAGACTACTTCATCAGATACTACCGCTGAGGCCTTCAATTCTTCATCCATCACACCTTCTCAACAACAACAACAACAACCCATTTTGGCCATAACAAGTGGTGAACGTTCTGATGAATTGGTCAACATGGTGTGGAAGTATCCCAGCAATGATGAGAATGGTCCCAGTAATAATAATATTATTGCTTCTGAGTCATCCAGCCGCAAGAATGGTTCGAACCCAGAAAGCCCTAAGTGCTCGTTGGGAGTACCCACTGAGTTTGGAGTGAGTGGTGGAGATTATGGGCATGGGCATTCCTCACTTCAGGCACCAAAATATGATGGAAACAATGGGAATTTGTGTTTGGTTAATCAAGTTCCTGTGTTTGCTCTGTGGAATGAATGA 1632 0.435 MLRSPNKTLSFTLSRILTVHILIDSRKAFDLDMVVLWVCVVNMSNWLGFCSTAHLRNIDARFGRENQDHGGTFPPTPPPPHLSIPLRSDGSLCVAEAFRHSAVVEEWTYDNAISGGNSNEEGPKLEDFLGCCYSNSPLAETKVYCQQDRNQIPNINISKINVNVAPSFNSNTETETGKNLTNPSSLLQSFHHAYGDDPQSQDPIPSNGMYKSLLNQTHFSNGKPSAEANGCNFHQSLSLTMSPGVYIGVGAISPVQVDDDSRKRSLDKSLARESIPRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQGYNHSPFGGVLNAQSSTYEKELEETKHMTRQEFVANLRRKSSTQEEAAEAYDIAAIKFRGTSAVTNFDISRYDVKRICSSSTLIGGDLAKRSPKETTSSDTTAEAFNSSSITPSQQQQQQPILAITSGERSDELVNMVWKYPSNDENGPSNNNIIASESSSRKNGSNPESPKCSLGVPTEFGVSGGDYGHGHSSLQAPKYDGNNGNLCLVNQVPVFALWNE 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0458 543 MobiDBLite consensus disorder prediction 417 443 - -
Glsi06g0458 543 CDD AP2 288 392 IPR001471 GO:0003700|GO:0006355
Glsi06g0458 543 PRINTS Ethylene responsive element binding protein signature 372 392 IPR001471 GO:0003700|GO:0006355
Glsi06g0458 543 PRINTS Ethylene responsive element binding protein signature 290 301 IPR001471 GO:0003700|GO:0006355
Glsi06g0458 543 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 364 477 - -
Glsi06g0458 543 MobiDBLite consensus disorder prediction 462 500 - -
Glsi06g0458 543 MobiDBLite consensus disorder prediction 465 495 - -
Glsi06g0458 543 MobiDBLite consensus disorder prediction 407 443 - -
Glsi06g0458 543 SMART rav1_2 289 396 IPR001471 GO:0003700|GO:0006355
Glsi06g0458 543 SUPERFAMILY DNA-binding domain 356 392 IPR016177 GO:0003677
Glsi06g0458 543 ProSiteProfiles AP2/ERF domain profile. 289 390 IPR001471 GO:0003700|GO:0006355
Glsi06g0458 543 Gene3D AP2/ERF domain 288 392 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0458 Glsi-ChrGlsi06 3943151 3948361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0458 82 415 AP2-EREBP Transcription Factor Family AT1G72570 38.372 1.43e-64 214