Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0455 ATGGAAAGGAGTCCTTGTTGTTGGAAGGAAGGTTTGAACAGAGGAGCATGGACAGTTTTAGAAGACAAAATACTCACAGAATACATTAACATTCACGGTGAAGGAAAATGGAGACAGCTACCGAAAAGAGCCGGTCTCAAGAGATGTGGAAAGAGTTGTAGGCTAAGGTGGCGGAATTATCTAAGACCTAATATTAAAAGAGGAAATATTACTCACGATGAAGAGGACCTCATTGTCAGACTTCACAACCTTCTTGGAAACAGGTCCGCTACTATTATATCTACTTCTGAGTTTGCCTCATTGGATTCCCATCCATTCTTGTGGTCTTTGATAGCACGACGTCTTCCAGGACGAACAGACAGTGAAATCAAGAACTACTGGAACGGTAGAATTAGAAAGAAGCTTGCAGGTAGCAAACCAAACTCTTCCACTTCGAAACCAAACCTAAACCGAGAGCAGGATCCTTACCCATCAAATCCGGGTTCCCGGTTGATCTGGACGAAGGCAACCAGGTGCACCAAGGTCATATTCCATCAACTTGGACCCACAATGGTTGCTCCCTCTGAGAGCCTCCACAAACCAGAGTCGCCGTTGTCGGTGCCCGCAGCTTCAGTTTGGGAGGGAAATGAGGAGTTGGATGTGATGATGGATTTTGAGAGTTTCTTCTCATCGGATCTCTTGAAGATGGACTTTTCAGAACTATCCTGCGATCAGAACGACATGGAAGAGGGTAAAGCCAGCTCAAGTCACGACAAAGGCCAGTTACCTCCAAATTCTAATGATTCCTTGCATGCTTTAGATTTTCAATCAATGGCATATTCCGTGGAATCTGAATTTGATTGGCTTTGA 849 0.4452 MERSPCCWKEGLNRGAWTVLEDKILTEYINIHGEGKWRQLPKRAGLKRCGKSCRLRWRNYLRPNIKRGNITHDEEDLIVRLHNLLGNRSATIISTSEFASLDSHPFLWSLIARRLPGRTDSEIKNYWNGRIRKKLAGSKPNSSTSKPNLNREQDPYPSNPGSRLIWTKATRCTKVIFHQLGPTMVAPSESLHKPESPLSVPAASVWEGNEELDVMMDFESFFSSDLLKMDFSELSCDQNDMEEGKASSSHDKGQLPPNSNDSLHALDFQSMAYSVESEFDWL 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0455 282 ProSiteProfiles Myb-like domain profile. 62 131 IPR001005 -
Glsi06g0455 282 FunFam MYB-related transcription factor 13 66 - -
Glsi06g0455 282 MobiDBLite consensus disorder prediction 239 263 - -
Glsi06g0455 282 CDD SANT 16 61 IPR001005 -
Glsi06g0455 282 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 151 - -
Glsi06g0455 282 CDD SANT 71 128 IPR001005 -
Glsi06g0455 282 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Glsi06g0455 282 MobiDBLite consensus disorder prediction 135 163 - -
Glsi06g0455 282 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Glsi06g0455 282 SUPERFAMILY Homeodomain-like 12 127 IPR009057 -
Glsi06g0455 282 Gene3D - 8 66 - -
Glsi06g0455 282 SMART sant 66 133 IPR001005 -
Glsi06g0455 282 SMART sant 13 63 IPR001005 -
Glsi06g0455 282 MobiDBLite consensus disorder prediction 137 157 - -
Glsi06g0455 282 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Glsi06g0455 282 Pfam Myb-like DNA-binding domain 67 128 IPR001005 -
Glsi06g0455 282 Gene3D - 69 156 - -
Glsi06g0455 282 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 108 135 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0455 Glsi-ChrGlsi06 3929709 3930934 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0455 4 147 MYB Transcription Factor Family AT3G13540 59.722 1.30e-53 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Glsi06g0455 Myb_DNA-binding 4.1e-09 CL0123