Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0448 ATGCTAGCTGAATCTGTGGTTCCGTTGCTGCTACTGAGCGGACTCGCTCTTGTGTCACTCTTTCTGCCTCTATGTCCGTATACTGGAGGTGCATGTGGTGGATTTTCCATGGAAACATTGGTTGAAATTGAGGATAATGATGAGGGGAAGCTTGGAGACTGTGGGTTTGATAGAAGTAGCTCTGCTTTGTCTTCACCGAAGCAGATCGCCAACCCAGTTGTGTACAAGCTCGTGCGGGTTGAAGGTGATGGGAGGTTAGTACCTGCAACAGATGATGAAGTAATGGAGGTGGAGGATTTTCTTGAGTATGACCAGAGTGAGATTGGCGTTGATGCAGAAACTGGGCATAGTGAGGGATGCATGTCGATTGAAAGGTCTTCCTCTGGGAAGCTTCAATTGGAGTCCTCAGAAGGTGTCTCACAATCAGACACTGCAGAGGCAGATATAGGGAAATTAAATGCACGGCTTCAGATGTTGCAAAAGGTGAAAGAGGAAGAGAAGCTTCGTCTGGCTTGTGGGTCACCTGGTCTTTCTCATGTAAATATAGACAGCCAGAGTTCTGCTTCTGAATTGCCCGTCATGGGTGGGACAATTCAATCTGATAATCCCTTTCAAGAAATTGTTCCTTCTTCAGCACCGACTTTTGATAATAGTCATAGTAATCAATCTCGAATTATTGGTGAATGTTCCAGACCTTCTGAAGGACAGATAGAAAGTGGATCACCTACGTCTGCTGTCTATTCTACTCTGAAGCCTGATTTGTCGTTGTTAAAAGGAGAAATATGCTTGGACAAGTTGTCAATCAGAGAACTTCACACACTGTTTAAAGTGACTTTTGGTCGGGAAACTACTGTGAAAGATAAGCAGTGGCTGAAGAGGAGGATTGCCATGAGTTTAACTAACTCATGTGATGTTTCAGCAACAACTTTTGTAGTTAAAGATAACAAACTAATTAAAAAATGTGAAGAAGATAGTTGTGGAAATGTGAATGCTCCACTCTCTAAGGATATTACAGCCGAAGAGTATATCAACTATGAGGGTACTGGAATTGAAGAAAATCAAGTCGTTTCTGGAAAGAGACTGATAAATCATGATGTGGAACATGATTCAGGAAGTGAGAATCTTCAGACAGAACAAAGAGCTGCCAAAAGAATCCGGAAGCCCACTAAGAGATATATTGAAGAGCTCTCTGAAAATGAATCTAGAGACCACGACCCAAGGTTGTTAAGTTCAAATAAAAATATGGGATTTGGACATGCCCCTCTAAACTCATATGTTGGGCCTGCTAGGAATGTTTTTTCAGAGGGGAGAACAGTTATCACAAGGTTGGACTCTCTTGGAGGTTCTGGGGTGTACGTACCTTGTGTTTCTCGGGTTCGCAGAAGTCGTCCAAGGAAGAATATCATACCTCTTATGAACTTCCATACAAGTGGCATGGTGGAGGCTGTAAAGTTAAGTAACAAGGCCCTTGGAGAGCATGATTCTCAGGCTGACAGTGAGAGTCAGGACGTAGTCTTGAAATCAAGATCCACACCAGCAAAATTTCAGGAGCCATCTACTGTTGAACCTGGGAAAGATAAGCAGTATCCAGTAATGGGCACAATTGAGCCACAGCATGAATCGAGACTGAGAAAGGCAAATCCATCTAGTTATACTTTAGATGACAATATAAATATAGTTACTGTTCCTACTGCAAAAGGTGGAATGAGAAGGAAACATCATCGAGCATGGACTCTTGTTGAGGTAATGAAATTGGTTGAAGGTGTATCACGGTGTGGTGCAGGGAGGTGGTCTGAGATCAAGCGACTTGCCTTTGCATCCTACTCACATCGTACATCTGTTGATCTTAAGGATAAGTGGAGGAATTTGCTTAAAGCTAGTTTTGCTCAAGCACCTGCAGATGAGGGGATGAATTCACGAAAGCATGGTACAGTTCCCATTCCTGAGCCAATTTTAGTCCGAGTAAGAGAGCTTGCAGAGATGAATTCTCAGGCGCCTGCAAATTTTAGCTCAAGCAAGCTGATGGCGGGTACCAGGAGTGTGCTCCAAGATAGATCATCAGGTTACTTGTAG 2073 0.4327 MLAESVVPLLLLSGLALVSLFLPLCPYTGGACGGFSMETLVEIEDNDEGKLGDCGFDRSSSALSSPKQIANPVVYKLVRVEGDGRLVPATDDEVMEVEDFLEYDQSEIGVDAETGHSEGCMSIERSSSGKLQLESSEGVSQSDTAEADIGKLNARLQMLQKVKEEEKLRLACGSPGLSHVNIDSQSSASELPVMGGTIQSDNPFQEIVPSSAPTFDNSHSNQSRIIGECSRPSEGQIESGSPTSAVYSTLKPDLSLLKGEICLDKLSIRELHTLFKVTFGRETTVKDKQWLKRRIAMSLTNSCDVSATTFVVKDNKLIKKCEEDSCGNVNAPLSKDITAEEYINYEGTGIEENQVVSGKRLINHDVEHDSGSENLQTEQRAAKRIRKPTKRYIEELSENESRDHDPRLLSSNKNMGFGHAPLNSYVGPARNVFSEGRTVITRLDSLGGSGVYVPCVSRVRRSRPRKNIIPLMNFHTSGMVEAVKLSNKALGEHDSQADSESQDVVLKSRSTPAKFQEPSTVEPGKDKQYPVMGTIEPQHESRLRKANPSSYTLDDNINIVTVPTAKGGMRRKHHRAWTLVEVMKLVEGVSRCGAGRWSEIKRLAFASYSHRTSVDLKDKWRNLLKASFAQAPADEGMNSRKHGTVPIPEPILVRVRELAEMNSQAPANFSSSKLMAGTRSVLQDRSSGYL 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0448 690 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 58 671 - -
Glsi06g0448 690 MobiDBLite consensus disorder prediction 369 389 - -
Glsi06g0448 690 MobiDBLite consensus disorder prediction 509 531 - -
Glsi06g0448 690 Pfam Myb-like DNA-binding domain 576 624 IPR001005 -
Glsi06g0448 690 CDD SANT_TRF 575 625 - -
Glsi06g0448 690 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 569 628 IPR017930 -
Glsi06g0448 690 Coils Coil 149 169 - -
Glsi06g0448 690 Gene3D - 564 673 - -
Glsi06g0448 690 ProSiteProfiles Myb-like domain profile. 577 624 IPR001005 -
Glsi06g0448 690 SMART sant 573 626 IPR001005 -
Glsi06g0448 690 SUPERFAMILY Homeodomain-like 575 634 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0448 Glsi-ChrGlsi06 3817890 3829018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0448 577 623 Single Myb Histone (SMH) Gene Family AT1G72740 46.939 4.18e-06 47.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi06g0448 Myb_DNA-binding 8.2e-07 CL0123