Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0440 ATGTTGACGTGTATAGCCTGTTCGAAACAGCTCAACAATGGATCTCTTCACCAACAAGAGGAGGTCGAAGCTGTGGAAACACCCAGCACCAAGCAAGCTATGAAGTCTCTCACTGCTCAGTTCAAAGACATGGCAGTGAAAGCTTCTGGAGCATATAGGAATTGCAAGCCTTGTTCAGGATCTTCAACTGATAACCGAAACTATGCCGACTCTGATGCGGCCTCAGAATCAGCAAGGTTCCACTGGGCCTACCGCAGAACAGGGAGCAGCAACTCAACGCCAAGGCTCTGGGGGAAAGAAATGGAAGCGAGACTAAAAGGTCTTTCAAGTGGGGAAGGCACGCCAGCATCAGTAAGTGGGCGTACTGAGTCCCCGGTTTTCATGGAGGAAGATGAGCCGAAGGAATGGGTTGCACAAGTGGAGCCTGGTGTGCTCATTACCTTTGTTTCATTGCCTCAGGGGGGGAATGATTTGAAGAGGATACGGTTCAGCCGTGAAGTTTTTAATAAATGGCAAGCTCAGAGGTGGTGGGCAGAGAATTATGAGAAAGTCATGGAGTTGTACAATGTTCACAGGTTCAATCAACTAGCAGTTCCTCTTCCAAACCTACCCAGATCTGAAGATGAGAGCTCAAAGATTGAATCTGCTATGGATAGTCCTGTTACTCCTCCTCTCAGTGAAGAGCGCCCACCTCGCCATTTTCAGCGTCCAATGGGAATGGATTATTCCTCATTAGATTCACTGGATCATCATCAAGCGCAATCCCGTCATTGCTATGAACCAAGTGGTCTAGCTTCAGCACCTAATCCTTCTGGCATCTTTGGGACAAAGACTGAAACCTCATCCATAGATGGTTCTGTGAGGACCAGTTCATCAAGAGAGGGAGATCAATCAGGAGAGCTCTCAGTCAGCAATGCAAGTGATATGGAGACTGAATGGATTGAGCAGGATGAGCCAGGAGTATACATCACTATCAGAGCAATGCCAGGTGGAACCCGAGAACTAAGGCGTGTTCGGTTCAGCCGAGAGAGGTTTGGAGAAATGCATGCCAGATTATGGTGGGAAGAGAACCGGGCAAGGATACACCAACAATACTTATGA 1101 0.4805 MLTCIACSKQLNNGSLHQQEEVEAVETPSTKQAMKSLTAQFKDMAVKASGAYRNCKPCSGSSTDNRNYADSDAASESARFHWAYRRTGSSNSTPRLWGKEMEARLKGLSSGEGTPASVSGRTESPVFMEEDEPKEWVAQVEPGVLITFVSLPQGGNDLKRIRFSREVFNKWQAQRWWAENYEKVMELYNVHRFNQLAVPLPNLPRSEDESSKIESAMDSPVTPPLSEERPPRHFQRPMGMDYSSLDSLDHHQAQSRHCYEPSGLASAPNPSGIFGTKTETSSIDGSVRTSSSREGDQSGELSVSNASDMETEWIEQDEPGVYITIRAMPGGTRELRRVRFSRERFGEMHARLWWEENRARIHQQYL 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0440 366 Pfam Transcription factor BRX N-terminal domain 23 58 IPR027988 -
Glsi06g0440 366 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 366 IPR044532 -
Glsi06g0440 366 MobiDBLite consensus disorder prediction 201 310 - -
Glsi06g0440 366 Pfam Transcription factor regulating root and shoot growth via Pin3 134 188 IPR013591 -
Glsi06g0440 366 Pfam Transcription factor regulating root and shoot growth via Pin3 310 365 IPR013591 -
Glsi06g0440 366 ProSiteProfiles BRX domain profile. 311 366 IPR013591 -
Glsi06g0440 366 MobiDBLite consensus disorder prediction 107 126 - -
Glsi06g0440 366 ProSiteProfiles BRX domain profile. 134 189 IPR013591 -
Glsi06g0440 366 MobiDBLite consensus disorder prediction 269 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0440 Glsi-ChrGlsi06 3767927 3772195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0440 1 366 Major Intrinsic Protein MIP AT1G31880 46.597 2.10e-100 299