Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0426 ATGTCTTCTTCTCCCTCCTCTGACGACACTTCCAATTCCAAATCCAATCTCCCTCTTAGGCCAATCCCCGGAGGTTATGGCCTCCCTTTCTTCGGTGCCATTTTTGACCGCTACGACTACTACTATAACCAAGGCCGTGACAAGTTCTTCATTTCCAGAATTCACAAACACAAATCCACCGTCTTCCGAACTAACATGCCTCCCGGTCCTTTCATTGCTTCCGACCCACGAGTCGTCGCAGTCCTCGACGCCCTCAGTTTTCCCATCCTCTTCGACACCTCCAAGGTCGAGAAACGCGACGTCTTCACCGGCACTTACATGCCCTCCACCATCTTCACCGGTGGCTACCGTGTCTGCGCCTACCTCGACCCTTCCGAACCCAAGCACTCCCTCATCAAGCGTTTCTTCTTCTACCTCATCTCCTCCCGACACGACCAGCTTCTCCCACTTCTCAGGAGCTACTTGTCGGAGATTTTCCTTAAACTAGAAGATAAGGTCTCCGACAAAGGCAAAGCTTACTTCAATTCCATAAGCGACAACGAGCTCTTCAACTTCGTGTTTCGGGTCTACTGCGGGAAAGACCCGAGCCAAACCAAACTCGGGTCCTACGGCCCGAAATACTTCGAGCTCTGGGTCTATCCTCAGGTTGCTCCATTGGGATCCCTTGGACTACCCTGGTACTTCTTCCCCGTCAATGTGGTGGAAGATTTTTTCCTCCATACGGTGCCGTTTCCGGCATTTTTGCTGAAATGGGTTCACAAGAAGCTCTACGACGCCATTTATACGTCGGCTATTCAAGAATTGGATGAGGCGGCGCGCTTAGGGCTCAGTAGAGAAGAAGCATGCAACAACCTGCTGTTCGTGCTGGGTTTTAACACCTACGGTGGGGTTAAAATCGTTATTCCGAGTTTGATGAAGTGGGTGGGATTAGCTGGGGAGGGTCTACACAAGGAGCTAGTTTATGAGATCAGGAGCGTTGTCAAGGCAGAAAATGGGGTCACACTGGGAGCGTTGGATAAGATGACTTTGACTAAATCAGTGGTGTGGGAGGTACTGAGGATAGACCCACCGGTTCAGTTCCAGTACGGGAAGGCGAAGGAGGATTTGGTGGTCCAGAGCCACGACGCTGCGTTTCAGATAAAGAAAGGGGAGATGATCTTTGGATATCAACCGTTGGCTACGAAGGATCCGAGAATCTTCGAGAATCCCGAGGAGTTTGTGGGGCATCGGTTTGTGGGAGAAGGGGAGAAGCTGTTGAAGTACGTGTATTGGTCGAATGGACGGGAGACGGAGGAGCCCATGGAGGAGAACAAGCAATGCCCGGGGAAAGATCTGGTGGTGTTGATGCTTAGGGTAACTTTGGTGGAGCTGTTCCTTCGTTACGATACGTTCACGGTGGAGCTTGGGAAGCCCTTGCTAGGTCCAACAGTTACCGTCAAGTCCTTGACCAAGGCCACTTCCTACTGA 1467 0.5147 MSSSPSSDDTSNSKSNLPLRPIPGGYGLPFFGAIFDRYDYYYNQGRDKFFISRIHKHKSTVFRTNMPPGPFIASDPRVVAVLDALSFPILFDTSKVEKRDVFTGTYMPSTIFTGGYRVCAYLDPSEPKHSLIKRFFFYLISSRHDQLLPLLRSYLSEIFLKLEDKVSDKGKAYFNSISDNELFNFVFRVYCGKDPSQTKLGSYGPKYFELWVYPQVAPLGSLGLPWYFFPVNVVEDFFLHTVPFPAFLLKWVHKKLYDAIYTSAIQELDEAARLGLSREEACNNLLFVLGFNTYGGVKIVIPSLMKWVGLAGEGLHKELVYEIRSVVKAENGVTLGALDKMTLTKSVVWEVLRIDPPVQFQYGKAKEDLVVQSHDAAFQIKKGEMIFGYQPLATKDPRIFENPEEFVGHRFVGEGEKLLKYVYWSNGRETEEPMEENKQCPGKDLVVLMLRVTLVELFLRYDTFTVELGKPLLGPTVTVKSLTKATSY 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0426 488 PANTHER CYTOCHROME P450 26 17 464 - -
Glsi06g0426 488 Pfam Cytochrome P450 317 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0426 488 FunFam Allene oxide synthase, chloroplastic 17 487 - -
Glsi06g0426 488 CDD CYP74 52 480 - -
Glsi06g0426 488 Gene3D Cytochrome P450 13 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0426 488 SUPERFAMILY Cytochrome P450 18 467 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0426 488 PRINTS E-class P450 group IV signature 378 392 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0426 488 PRINTS E-class P450 group IV signature 341 357 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0426 488 PRINTS E-class P450 group IV signature 440 458 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0426 488 PRINTS E-class P450 group IV signature 394 412 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0426 Glsi-ChrGlsi06 3671315 3672781 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0426 10 486 Cytochrome P450 AT5G42650 53.027 1.91e-175 501