Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0411 ATGGAAATGGTAACGGTTAGACCTGTGGACTTTGAGCCGAAGGAAGGGGAGATCACATTGAGGAAAAATAGCTTCCAGATGCGCAATTTCAATGATTTCTATAAGCCTGATGAGCTAGATGAGGTTAACACTGAAGAATCTACATGTTCAAAGAGAAGGAAGGTGGCAAATCTGAAGCTCCAAACCACATTCTCATTTAAATATCTACTTTCAGATAACTCTCATTTGGAGGGGAAAGTTGAGGACTTGTTCAATAAACAAAACCCCTCAGTTTTGTTACCAAAACCGGAAATTTGGTTTTCTCCAAAGTCCATTGGCGAGCTTGATGTAGCTGCAATTAAGCTGCAGAAGGTTTACAAGAGTTACCGGACAAGAAGAAATCTAGCAGATTGTGCAGTTGTTTGTGAGGAGCTATGGTGGAAGGCTTTGGACTTTGCAACTCTTAACAGGTGTTCCATATCACATTTTGACTCTGATAAATCAGAAACAGCTATTTCAAAATGGGCAAGAGCAAGGACGATGGCTGCTAAGGTGGGAAAAGGTTTGTCCAAAGATGACAAGGCACAAAAATTAGCTCTAAGGCACTGGCTCGAAGCAATTGATCCCCGTCATCGTTATGGGCACAACCTGGACTTCTACTATGATGTCTGGTTTCAGAGCCAGAGCTCTCAACCTTTTTTCTACTGGTTGGATGTTGGAGATGGCAAAGAAGTAAATCTTGAGAAGTGCTCTAGAAGTAAGCTACATAAGCAGTGCATAAAGTACCTTGGACCCAAAGAGAGGGAAGCATATGAAGTGATTGTAAAGAGTGGAAGGCTGGTTTATAGACAAAGCCAGGCACTTGTACACACAAATGAGGGATCTAAGTGGATTTTTGTTCTTAGCACATCTAGAACTCTGTACATTGGGGAGAAGAAGAAAGGCCTATTTCAACACTCAAGTTTTGTAGCTGGTGGTGCTACCATTGCATCTGGAAGATTGGTTGCCCTGCATGGAGTTCTTGATGCTATTTGGCCCTACAGTGGTCATTACCGACCAACAGAGAAGAATTTTAAGGAATTTATTGGCTTCTTGGAAGAACATAATGTGGACATGACAAATGTGAAGAAATATGCAGTTGATGATGATGTGCCTCCTTCTATACCTGTTAATGACGAACTGCAATCTGGGTCCATAGAAGGTAATGTGGGTCCCAGTGACCCTACCAATTCCAAAGGTTGTAGTAAAGAAAAAGTGGATCACTTCGGCACCAAGGTGGAAGCTTCGCAACAAAATGGGGCCAAGTCATTGTCAAGCAAATGGACAACTGGAGCTGGTCCTCGGATTGGTTGTGTTAGAGAATACCCAACAAAACTCCAACTTCAGGCACTTGAGCAGCTCAATCTATCGCCTAGGGTCACCCCTGGAAAATTTTCTCCCAAAGCACCTATTCCCTCTCCAAGGCCGAGTTCAAAAATCCATTTATCACCAAGACTTGTGCATATGGGACTTCCTAGCCCAAGCCAGCAGAAGAAGTTCCCAAGTCAAAGAACACAGAAACTCAACACAGCTTGCTCTGTCTCCAACTCCCTCTCCACAGCTTCCAGAAGCCTGCAGGATCTGATCGGGTCTTTTCTCTGTAAAATCGAGTTCTTTTCTCCAATGGGCGCTTCTGGAAAATGGCTAAAATCATTCATTTCTCTTAAAAAACCCCCCGCGAATGATCAAGAGAAGGTTGTTGATAAGAGTAAAAAGAAGTGGAGGCTATGGAGGAGCCCTTCAGAAGGCTTTGGAACCTCCATGAAAAGCATGAACAAGGGACACGGTGCCGTATCTGAAAAGTCTGATTCTTCGTTTCTGTTGGATGATGCTTTTACTGCTGCCATGGCTGCTGTGGTCCGAGCTCCACCTAAAGGCTTCATGGTAATCAAGCAGGAATGGGCTGCGATCCGCATTCAGGCTCTGTTTCGAGGCTTCTTGCAAGGATGGTGTGAAATTCCAGGAAGTGCTGATGAAGTTAAAGCAAAGCTACAGATGAGGCAAGAAGCGGCCATCAAAAGGGAGAGAGCGATGGCATATTCTCTCTCCACACAGCAACCAAGAGCGAGTGCTAGTCCAAATTCTAGATCCACAAAGGCAGTGAGTCCACTTGAAAATCGGAGCCTAGACTGTAGGAGCTTGTTAGAGCGGTGGATGGCAACCAAGCCATGGGAAAACAGGTCTTTACCAGACATGACTCCATTATCTAGTAGGAAAAATGAGGACCTTGTTCTCCCCTCTCAAACATTTAAGGAACATAGCTTAATCAGAGCAAGAAGGAATGCAGTGACAACCAGGATTGCTGCTAAACCCCTTACAACCAGCCAATCAACTCCATCTTCATCTTCAGCCATGAGTTCTGAATGCATGTATGATGATAGCCCAGTATCAGCTTCACGTACCTCTGGATCACCACCATCTGTACCATATACTAACACTTTTGTGGGGGAAACAACTGAGGAAAAGGAAGTTGACAAACCAAGCTACATGAATTTCACAGAGTCAACTAAGGCTAAACAGCGAGCTTGCAGGTGTTCTTCTCAGAACTCAAAGAGACTCTTGATGGAGGATTGTCTGTCTCGTAGCACAACATCAGCCTTTTTGAATGGAGATACTAGAAGCAGTTCTGGTTCTGATCCTTCAATTAATTTTTGGAGAGATCTGTATGGAACGCCTCAAAGGGCAAATTATCAAAGACGATACTACACTAGGAGATAA 2736 0.4397 MEMVTVRPVDFEPKEGEITLRKNSFQMRNFNDFYKPDELDEVNTEESTCSKRRKVANLKLQTTFSFKYLLSDNSHLEGKVEDLFNKQNPSVLLPKPEIWFSPKSIGELDVAAIKLQKVYKSYRTRRNLADCAVVCEELWWKALDFATLNRCSISHFDSDKSETAISKWARARTMAAKVGKGLSKDDKAQKLALRHWLEAIDPRHRYGHNLDFYYDVWFQSQSSQPFFYWLDVGDGKEVNLEKCSRSKLHKQCIKYLGPKEREAYEVIVKSGRLVYRQSQALVHTNEGSKWIFVLSTSRTLYIGEKKKGLFQHSSFVAGGATIASGRLVALHGVLDAIWPYSGHYRPTEKNFKEFIGFLEEHNVDMTNVKKYAVDDDVPPSIPVNDELQSGSIEGNVGPSDPTNSKGCSKEKVDHFGTKVEASQQNGAKSLSSKWTTGAGPRIGCVREYPTKLQLQALEQLNLSPRVTPGKFSPKAPIPSPRPSSKIHLSPRLVHMGLPSPSQQKKFPSQRTQKLNTACSVSNSLSTASRSLQDLIGSFLCKIEFFSPMGASGKWLKSFISLKKPPANDQEKVVDKSKKKWRLWRSPSEGFGTSMKSMNKGHGAVSEKSDSSFLLDDAFTAAMAAVVRAPPKGFMVIKQEWAAIRIQALFRGFLQGWCEIPGSADEVKAKLQMRQEAAIKRERAMAYSLSTQQPRASASPNSRSTKAVSPLENRSLDCRSLLERWMATKPWENRSLPDMTPLSSRKNEDLVLPSQTFKEHSLIRARRNAVTTRIAAKPLTTSQSTPSSSSAMSSECMYDDSPVSASRTSGSPPSVPYTNTFVGETTEEKEVDKPSYMNFTESTKAKQRACRCSSQNSKRLLMEDCLSRSTTSAFLNGDTRSSSGSDPSINFWRDLYGTPQRANYQRRYYTRR 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0411 911 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 49 486 IPR044159 -
Glsi06g0411 911 MobiDBLite consensus disorder prediction 386 410 - -
Glsi06g0411 911 MobiDBLite consensus disorder prediction 773 828 - -
Glsi06g0411 911 MobiDBLite consensus disorder prediction 773 823 - -
Glsi06g0411 911 Pfam IQ calmodulin-binding motif 640 654 IPR000048 GO:0005515
Glsi06g0411 911 Pfam IQ calmodulin-binding motif 111 127 IPR000048 GO:0005515
Glsi06g0411 911 MobiDBLite consensus disorder prediction 386 405 - -
Glsi06g0411 911 MobiDBLite consensus disorder prediction 688 709 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0411 Glsi-ChrGlsi06 3542430 3549957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0411 548 895 IQD Protein Family AT1G72670 34.713 1.29e-41 156
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g0448 07 3367904 3375316 Glsi06g0411 06 3542430 3549957 CCT
Glsi06g0411 06 3542430 3549957 Glsi06g0411 06 3542430 3549957 ECH