Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0406 ATGGGTGCATTGTCTAGCATATATACCTGTGAATTTATGTCTGATCATGTGTGTCTTTGGTACGATGAACGATGACAAAATTTAAGTGTAGTTCTTTCCCCTGTATTGTTCGCTCTAGTCATGGACATGCAGAAAGAGAGAATTAAAAGTGGATGCCAGAAGATTCTGGAAGGAATAGACTCCATGTCTTTAATAAATTTAGATGACCAACAAGTGCATTCATTAGTAATGATGAGAGAAATAGCTCGTGGGGTTGTTGATGATCGAGGTAGAAAGGTGACAAAGAATGACGTAATTAGTGCTTTGCGCTTCAGTATCGAGAAAATGGTGTGTGCATCCAGGGATATCATTGAAGTATTAAGTAGGATGTCATATGAAGGCTTAGATGACCGAAGAATGCATTTAGTGTTGAAGATGAAAGAAATTGCACATGGGATTATTGATAAACAAGCTAGAGTTGCAATAACTAGGCATGACATACTTGCAGAACAAGTTGGAGTTGCTGATGAAGGGATGAGAGATAGTCCCATACTTGAGTCAACAAAGACAAGCAATGGTGATATCCTGATTGATGGGGGCGACAACATGTTAAATGAAGATGAGATGTTGGAGGTAGAAAATGTTTTAAGGCTTGAAAATGGAATAAATGATGTACAGGAGTCTCTGTTGCCATCATCCTTTCAGCAATTTCTTCTGTGGCCTCCAGATGATTGCATCACCTTAGAATGGGTTCAGGACATGATGTTCACCCTTGAGCAGGCTTCACAGAAGATGTTGCCATCTGAATTCGGCCATGTCATGCCAACCATTTTGATAGATAAATTGACAGATACTGCTTGCAGTATACTATGTAAAGAACCAAATTGCGTGGAGATAGATTGTCAAGGAGAAGATTCAAGAATCATTGTAGTAGGCGACATACATGGGCAGTTTTATGATTTACTGTTTCTTTTCAAGTATTTAGGCATGCCCTCCGAGAACCTGTTTTATGTTTTCAATGGAAATTATGTAGATAAAGGAGCATGGGGCTTGGAGGTATTTTTGGTCTTGCTAGCTTGGAAGGTCTTGATGCCTCACAGAGTATATCTACTCCGTGGAAATCACGAATCAAAATATTGCACTGCAAGATATGGTTTTAAGAAGGAGGTGCGAACAAAATACGGTTATCAAGGTGAAGATGTCTACAATAAATGCCTACAGTGTTTCAAGGAGCTTCCATTAGCTTCAGTTATATCTGGCTGTGTTTATACTACTCATGGAGGGCTTTTCCGTAGCATAAATGCTGCTCCTTCGCGAAAGCCAAAACGGAAGAAGACACAGAGAGTGGATCTTGGGTCTTTGGCTGAGTTATCTGAAGTTAACAGATCTTCTGTAGATGCCCCGCATGAAGGTCCTAACATATTATTGAGCGATATTCTTTGGTCAAAACCATCTAAAAAGGATGGTCTGAGGGATAATGCAGGTCGAAAGTTAGGTCTATGGTGGGGTCCTGATTGCACTGAGGCTTTCTTAAAACAGAACAAATTGAAGCTGATCATCAGATCACATGAAGGACCTGATGCAAGGGTTGGTCGGGATGATTTTGGGGATATGTTGTGTGGATACAGCATGGATCATGATGGAGAATCAGGAAAGCTATATACACTCTTCAGTGCTCCTGACTACCCACAGTTTGGTAAGAGGAGATATAACAATGAAGGAGCATATGCAATATTGAAGTCGCCAGATTTTGAAATTCCTATCTTTCACTCATTCAAATCTGCAGAAAGACCAAAGGTGGATCCTTATGTTGATTATGATGCTGATGAAATGGATTTAAGCAAACTAGACTCTTCTCAAATGAATGCACAGGCCTCAACCTCTGCCATATCTGCTCCTCAAAGATCTTATCCAGCCGGGGTGACACCCGGGTTTGACTTTGGGGCGTTGGGCATTTATAATGCCCCATCTTGGAGTGTTCAGCTTCCTGATGGTTCAGGTGGCACCCAAGTTGTGCAGGTTCCAAGGGCTCCTGTGGTGGAAGGACTGCCTCTTCCTCACAACATACAGGAGCCGCACAAGGCTGCTTACGAGTATCTGTTCGAGCTTATTGCTTCCCTAAAACTTATGCTTATGACAAGGGAATCTGAGAACAGGGCCAATCTGTCAGCTTTGCGAAGTAGAGCTAGGAAACAAAAAGGAAGGGCTAATAGTTAG 2196 0.4162 MGALSSIYTCEFMSDHVCLWYDERXQNLSVVLSPVLFALVMDMQKERIKSGCQKILEGIDSMSLINLDDQQVHSLVMMREIARGVVDDRGRKVTKNDVISALRFSIEKMVCASRDIIEVLSRMSYEGLDDRRMHLVLKMKEIAHGIIDKQARVAITRHDILAEQVGVADEGMRDSPILESTKTSNGDILIDGGDNMLNEDEMLEVENVLRLENGINDVQESLLPSSFQQFLLWPPDDCITLEWVQDMMFTLEQASQKMLPSEFGHVMPTILIDKLTDTACSILCKEPNCVEIDCQGEDSRIIVVGDIHGQFYDLLFLFKYLGMPSENLFYVFNGNYVDKGAWGLEVFLVLLAWKVLMPHRVYLLRGNHESKYCTARYGFKKEVRTKYGYQGEDVYNKCLQCFKELPLASVISGCVYTTHGGLFRSINAAPSRKPKRKKTQRVDLGSLAELSEVNRSSVDAPHEGPNILLSDILWSKPSKKDGLRDNAGRKLGLWWGPDCTEAFLKQNKLKLIIRSHEGPDARVGRDDFGDMLCGYSMDHDGESGKLYTLFSAPDYPQFGKRRYNNEGAYAILKSPDFEIPIFHSFKSAERPKVDPYVDYDADEMDLSKLDSSQMNAQASTSAISAPQRSYPAGVTPGFDFGALGIYNAPSWSVQLPDGSGGTQVVQVPRAPVVEGLPLPHNIQEPHKAAYEYLFELIASLKLMLMTRESENRANLSALRSRARKQKGRANS 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0406 731 Gene3D - 254 630 IPR029052 -
Glsi06g0406 731 PRINTS Serine/threonine phosphatase family signature 451 478 IPR006186 GO:0016787
Glsi06g0406 731 PRINTS Serine/threonine phosphatase family signature 300 327 IPR006186 GO:0016787
Glsi06g0406 731 PRINTS Serine/threonine phosphatase family signature 363 387 IPR006186 GO:0016787
Glsi06g0406 731 PRINTS Serine/threonine phosphatase family signature 545 561 IPR006186 GO:0016787
Glsi06g0406 731 PRINTS Serine/threonine phosphatase family signature 330 357 IPR006186 GO:0016787
Glsi06g0406 731 PRINTS Serine/threonine phosphatase family signature 400 426 IPR006186 GO:0016787
Glsi06g0406 731 Pfam Calcineurin-like phosphoesterase 300 519 IPR004843 GO:0016787
Glsi06g0406 731 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 73 714 - -
Glsi06g0406 731 SMART pp2a_7 267 589 IPR006186 GO:0016787
Glsi06g0406 731 SUPERFAMILY Metallo-dependent phosphatases 266 593 IPR029052 -
Glsi06g0406 731 ProSitePatterns Serine/threonine specific protein phosphatases signature. 364 369 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0406 Glsi-ChrGlsi06 3508265 3515766 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0406 231 511 Calmodulin-binding Proteins AT5G63870 54.983 9.14e-102 313