Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0377 ATGAACATGTCAAGAAATGGTAACGGCACCACCCAGGCTTGCGCTGCTTGTAAGTACCAACGCAGGAAGTGCGCTCCTGACTGCATTCTCGCACCTTATTTTCCTCACGATCGCCAAAGACAATTCCTCAATGCCCATAAATTATTTGGCGTAAGCAACATCACCAAAATCATCAAGCACCTTGAGCGGCCTCAGGACAAAGACCAAGCCATGCGCACCATCATCTACCAATCTGACATGCGCGCCAACGACCCTGTTTGGGGTTGTTATAGGGTCATCGAAGAGCTTCAAGCCCAGATCGCGTACCACGAGGCAGAGCTCGACCTTGTTCTTCAACAACTCGCCATTTGTAGAGCGCAAGCTCATCATCATCATCAACAGCATTCTGCCTACAATAACGGGGATCAAGTTCTACACGCAGATCCTTTGACCTTGTACAACTCTCCTTCTGCTGCTGCTGCGCCTCATTACCATTATCTTCAACAAGTGCCTCCTCAGCAGGAGCAGTATATTGTTGTCCAAGAAAATAATACTAGCAACGCCTCTTTGCAGGAAGATGTTCATTCTTGGGCTATGCAAGATTCAATGTCACTTTCTTCGTTGTCACTGCAGGCTCAGAATGGTAATGGTAATGGAGATGAATATGATCATAAGCCGATGCTTGAGATATCTTCTGATGAAAGAAATGATCTCAGATTCGAGCCTGAAGAATTAGTCGAGCGCAGTGATGAAGCAGTTTTATTTAAGATAGACAACGAAGTAGTGAAAGCAGATTCTGATCAGTGCATCCAGCAAGCTCAAGATCATGATCTGAAAGATATAAGGCAGAGGGCATCAGATCTTCAATGTAGGCCACATTGGGAGGGCGGGGAAGGGGAGTGGAATGAATCAACTGTTTCAAAGAGAAAAGAAAATGAAAACAAGCAGATATCAGAGAATTATTCAAAACTCTCTTGCAAAAAAATATACATAACAACTGTCTCCCACTATACTTCGGCAATCTTTGTTGCATTTACAAACATTTAA 1026 0.4405 MNMSRNGNGTTQACAACKYQRRKCAPDCILAPYFPHDRQRQFLNAHKLFGVSNITKIIKHLERPQDKDQAMRTIIYQSDMRANDPVWGCYRVIEELQAQIAYHEAELDLVLQQLAICRAQAHHHHQQHSAYNNGDQVLHADPLTLYNSPSAAAAPHYHYLQQVPPQQEQYIVVQENNTSNASLQEDVHSWAMQDSMSLSSLSLQAQNGNGNGDEYDHKPMLEISSDERNDLRFEPEELVERSDEAVLFKIDNEVVKADSDQCIQQAQDHDLKDIRQRASDLQCRPHWEGGEGEWNESTVSKRKENENKQISENYSKLSCKKIYITTVSHYTSAIFVAFTNI 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0377 341 Coils Coil 93 113 - -
Glsi06g0377 341 MobiDBLite consensus disorder prediction 286 307 - -
Glsi06g0377 341 Coils Coil 300 320 - -
Glsi06g0377 341 ProSiteProfiles LOB domain profile. 12 114 IPR004883 -
Glsi06g0377 341 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 156 - -
Glsi06g0377 341 Pfam Lateral organ boundaries (LOB) domain 13 109 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0377 Glsi-ChrGlsi06 3085794 3092276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0377 12 237 AS2 family AT3G13850 51.724 2.12e-59 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Glsi06g0377 LOB 4.6e-36 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g0377 06 3085794 3092276 Glsi07g0422 07 3013274 3018974 CCT