Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0360 ATGAGTCGAGAACAACAGAAGCGAGGGAGGCAAGAAAAAGGTTCTGATGGTGCGGAGAAAGTTATTGTTGCCGTTAAGGCATCAAAGGAAATTCCAAAGACTGCTCTGGTTTGGTCTTTGACTCATGTTGTTCAACCTGGGGATTGCATTACTCTGCTAGTAGTTGTTCCTTCACAAAGTTCAGGTAGAAGATTATGGGGTTTTCCAAGATTTGCTGGTGACTGTGCCAGTGGCCACAAGAAGTCTCCTGGAACAAGCTCAGAGCAGAAGTGTGATATTATCACCGATTCTTGCTCTCAGATGATCCTTCAGCTCCATGATGTCTATGACCCAAATAAGATAAACGTTAAGATTAAAATTGTTTCTGGATCACCCGGTGGAGCTGTGGCTGCAGAGGCCAAGAAAGCCCAAGCCAATTGGGTCGTATTAGACAAACAGCTAAAAAATGAGGAAAAACGGTGCATGGAAGAGCTGCAGTGCAACATTGTGGTTATGAAGCGTTCCCAGCCGAAAGTACTCCGCTTAAATTTGGTTGGATCACAACAAAAGGATCCTGAAGACGCAGGTCTAGTTCCATCTAAGCAAGATGAGATGCCTGGAAAACAAACAAAAAAGAAGAATGATTCTTTAAATTCTAGAAAAGGACCAGTTGTCACCCCAACTAGCAGCCCAGAGCTAGGGACACCGTTCACTGCAACTGAAGCTGGCACTTCCTCAGTTTCAAGCTCAGATCTGGGAACCTCACCATTTGTCATCTCAGAGATGAATGTTGAGTTGAAGAAAGAGGAAACAATCAAGGAAAATCAAGACCATGATGATACTAATTCAGACACAGACAGTGAAAATCTGTCCACATCTTCAGCAAGCTTGAGATTCCGGCCATGGATCACAGAATTACTTTTACATCAACGATCGTCTCAGCACAGAGAAGAAAGATCAGAAAGACCTTATGATAAGCCTCAAACATCTACAACTAGAGCTTTGCTAGAGAAGTTCTCAAAGCTTGATAGAGAAGCTGGAGCTGAAATCTCAACATATAGAACTGACTTGGATTTCAGTGGAAATTTAAGAGATGCTATAGCATTATCCAGAAATGCCCCTCCTGGACCCCCTCCATTGTGTTCAATTTGTCAGCACAAAGCACCTGTTTTTGGAAAGCCTCCAAAGTGGTTCAGCTATGCTGAGTTGGAGCTTGCTACTGGTGGATTTTCACAAGCCAACTTCTTGGCAGAAGGAGGATTTGGATCTGTTCACAGAGGGATTCTACCAGATGGACAAGTCATTGCTGTCAAGCAACATAAATTGGCTAGTTCTCAGGGTGATCTTGAATTTTGCTCAGAGGTAGAAGTCCTGAGCTGTGCTCAGCACCGAAATGTTGTTATGCTGATTGGGTTCTGTGTAGAGGATAAGAGAAGGCTATTGGTTTATGAGTATATATGCAATGGATCACTAGATTCTCATTTATATGGGCGACAACGTGAACCATTAGAATGGTCTGCAAGGCAAAAAGTTGCTGTTGGAGCAGCTCGAGGGTTGCGATATCTTCATGAAGAGTGCAGAGTGGGTTGCATCATTCACCGTGACATGCGGCCAAACAACATCCTCATCACCCATGATTTTGAACCACTGGTTGGTGATTTTGGACTAGCAAGGTGGCAGCCTGATGGAGACACAGGTGTGGAAACTAGAGTAATTGGAACATTTGGGTACTTGGCTCCAGAATATGCTCAAAGTGGCCAAATCACTGAAAAGGCTGATGTTTACTCCTTTGGAGTGGTATTAGTGGAACTTGTTACAGGGCGAAAAGCCGTGGATCTCAATCGGCCGAAGGGACAGCAGTGTCTTACTGAGTGGGCACGCCCACTGTTAGAAGAATATGCCATTGAGGAACTGATTGATCCGAGGCTGGGAAATTGCTATTCAGAACATGAAGTCAATTGCATGTTGCATGCTGCATCATTATGCATTCGACGAGATCCTCATGCTAGACCACGTATGTCACAGGTTCTCCGGATACTAGAGGGTGACATGATCATGGAAACAAATTACATTTCAACTCCTGGTTACGATGTTGGAAACCGGAGTGGTCGAATCTGGGCAGGGCAGCAGCAGCAGAGGCAGTACCATTACAGTGGTCCCCTGTTAGAAGAGTCACTGGAAGCGTTCAGTGGGAAGCTTTCCCTAGAGAAATACAGGCCCTCTCATTGGGAAAGGGACAAGGTTAGGTGA 2229 0.4477 MSREQQKRGRQEKGSDGAEKVIVAVKASKEIPKTALVWSLTHVVQPGDCITLLVVVPSQSSGRRLWGFPRFAGDCASGHKKSPGTSSEQKCDIITDSCSQMILQLHDVYDPNKINVKIKIVSGSPGGAVAAEAKKAQANWVVLDKQLKNEEKRCMEELQCNIVVMKRSQPKVLRLNLVGSQQKDPEDAGLVPSKQDEMPGKQTKKKNDSLNSRKGPVVTPTSSPELGTPFTATEAGTSSVSSSDLGTSPFVISEMNVELKKEETIKENQDHDDTNSDTDSENLSTSSASLRFRPWITELLLHQRSSQHREERSERPYDKPQTSTTRALLEKFSKLDREAGAEISTYRTDLDFSGNLRDAIALSRNAPPGPPPLCSICQHKAPVFGKPPKWFSYAELELATGGFSQANFLAEGGFGSVHRGILPDGQVIAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCVEDKRRLLVYEYICNGSLDSHLYGRQREPLEWSARQKVAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIEELIDPRLGNCYSEHEVNCMLHAASLCIRRDPHARPRMSQVLRILEGDMIMETNYISTPGYDVGNRSGRIWAGQQQQRQYHYSGPLLEESLEAFSGKLSLEKYRPSHWERDKVR 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0360 742 MobiDBLite consensus disorder prediction 303 324 - -
Glsi06g0360 742 MobiDBLite consensus disorder prediction 303 319 - -
Glsi06g0360 742 PANTHER OS01G0750732 PROTEIN 255 681 - -
Glsi06g0360 742 MobiDBLite consensus disorder prediction 264 278 - -
Glsi06g0360 742 MobiDBLite consensus disorder prediction 212 247 - -
Glsi06g0360 742 Pfam Protein tyrosine and serine/threonine kinase 407 672 IPR001245 GO:0004672|GO:0006468
Glsi06g0360 742 MobiDBLite consensus disorder prediction 176 247 - -
Glsi06g0360 742 Gene3D Phosphorylase Kinase; domain 1 375 478 - -
Glsi06g0360 742 MobiDBLite consensus disorder prediction 264 286 - -
Glsi06g0360 742 ProSiteProfiles Protein kinase domain profile. 403 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g0360 742 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 375 478 - -
Glsi06g0360 742 ProSitePatterns Tyrosine protein kinases specific active-site signature. 524 536 IPR008266 GO:0004672|GO:0006468
Glsi06g0360 742 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 479 682 - -
Glsi06g0360 742 Gene3D Transferase(Phosphotransferase) domain 1 479 685 - -
Glsi06g0360 742 SUPERFAMILY Protein kinase-like (PK-like) 387 680 IPR011009 -
Glsi06g0360 742 CDD STKc_IRAK 409 675 - -
Glsi06g0360 742 FunFam Dual-specific kinase DSK1-like 12 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0360 Glsi-ChrGlsi06 2955024 2959254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0360 344 669 Trihelix Transcription Factor Family AT1G68690 50.453 1.18e-99 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Glsi06g0360 PK_Tyr_Ser-Thr 9.1e-41 CL0016