Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0351 ATGCAAGACCCAACTGCGTTCCAACCCATGAAAAGCGAATTTCATGAACAAGTACAGCTTAAATGCCCCCGTTGTGACTCCACAAACACCAAGTTCTGCTATTACAACAACTACAACCTCTCGCAGCCCCGCCATTTTTGCAAGAATTGCAGAAGGTATTGGACCAAAGGTGGCACTCTCAGGAACATCCCAGTTGGAGGTGGAAGCCGAAAGAACACAAAGAGGTCATCCACATCCAGCGCCAAACGCTCTGCATCATCTTCTCCATCGGTTTCGTCGGCCATTGCAGCCGAGGCTGTAGCTCCAGAGGCTGAACCGACCCGGGTTTATACTAACCCGATTGATCAAAGCCGACGGGAGCTGAACATTGGTGGGAGTTTCAGTTCCCTTCTAGCATCAACTGGGCATTTGGGGAGTCTCTTAGAGGGCCTGAACTCAAATGGGTCTGGTCTAAAAATGGCGCAATTGGGTGAATTTGGGGAGAATGTGAGTTCTGAACTGGTTATGAATTCGGATTCAGGTAGAAATCCGGGTTCGGAGATGCAGAGTAATAATGGCAATTCAGAGAGCTTTCTGGGTTTGCAAAATGGCGATTCAAGCTGTTGGAATGGTGGCAATGGGTGGTCTAACCTTGCAATGTATACACCAGGCTCGAGTTTGCAGTAG 666 0.488 MQDPTAFQPMKSEFHEQVQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGTLRNIPVGGGSRKNTKRSSTSSAKRSASSSPSVSSAIAAEAVAPEAEPTRVYTNPIDQSRRELNIGGSFSSLLASTGHLGSLLEGLNSNGSGLKMAQLGEFGENVSSELVMNSDSGRNPGSEMQSNNGNSESFLGLQNGDSSCWNGGNGWSNLAMYTPGSSLQ 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0351 221 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 15 184 IPR045174 GO:0003700|GO:0006355
Glsi06g0351 221 MobiDBLite consensus disorder prediction 69 94 - -
Glsi06g0351 221 MobiDBLite consensus disorder prediction 61 113 - -
Glsi06g0351 221 Coils Coil 220 221 - -
Glsi06g0351 221 ProSiteProfiles Zinc finger Dof-type profile. 20 74 IPR003851 GO:0003677|GO:0006355
Glsi06g0351 221 ProSitePatterns Zinc finger Dof-type signature. 22 58 IPR003851 GO:0003677|GO:0006355
Glsi06g0351 221 MobiDBLite consensus disorder prediction 170 192 - -
Glsi06g0351 221 Pfam Dof domain, zinc finger 19 74 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0351 Glsi-ChrGlsi06 2889814 2890479 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0351 13 141 C2C2-Dof Transcription Factor Family AT1G51700 55.797 4.32e-43 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Glsi06g0351 zf-Dof 3.4e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g0351 06 2889814 2890479 Glsi06g0351 06 2889814 2890479 ECH