Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Glsi06g0345 | ATGAATTCAGGTTGTTTCAGAGGTTCAATAACATTTTATCCTTATTGTACTCGAATGTTGACACAAACAGGTCCCTTTCCTCGCAACTTTGAGAAGCGGAAGCCAACAGGGAAAGAGAAGATGGCCACAGTACCAGGGCAGCTCATATGGGAGATCGTGAAGAGGAACAACTCTTTCTTGGTGAAAGAGTTTGGTAGGGGCACTCAGAGCGTGCAGTTCAGCAAAGAGAGCAACAATCTCTACAACCTCAACTCTTTCAAGCACTCTGGTTTGGCAAACAAGAAGACCGTTACTATTCAACCTGGGGGCAAAGATCAATCTGTGTTGCTGGCGACGACCAAGACAAAGAAACAGAACAAGCCTGCTGCTTTACTTCATAAATCTGTCATGAAAAAGGAGTTCCGAAGGATGGCAAAGTCTGTGGAAAACCAGGTGGCAGATAACTACTACAGGCCTGATCTTAAGAAGGCAGCCCTTGCAAGGTTGAGTGCTGTTAATAGGAGCCTTAGAGTTGCGAAATCTGGTGTGAAGAAGAGGAACAGACAGGCTGTGAAGGTCCATGGTAGAAAGTGA | 573 | 0.4555 | MNSGCFRGSITFYPYCTRMLTQTGPFPRNFEKRKPTGKEKMATVPGQLIWEIVKRNNSFLVKEFGRGTQSVQFSKESNNLYNLNSFKHSGLANKKTVTIQPGGKDQSVLLATTKTKKQNKPAALLHKSVMKKEFRRMAKSVENQVADNYYRPDLKKAALARLSAVNRSLRVAKSGVKKRNRQAVKVHGRK | 190 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Glsi06g0345 | 190 | Gene3D | - | 46 | 173 | - | - | |
Glsi06g0345 | 190 | PANTHER | 60S RIBOSOMAL PROTEIN L28 | 41 | 190 | IPR002672 | GO:0003735|GO:0005840|GO:0006412 | |
Glsi06g0345 | 190 | FunFam | 60S ribosomal protein L28 | 45 | 173 | - | - | |
Glsi06g0345 | 190 | Pfam | Ribosomal L28e protein family | 48 | 168 | IPR029004 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Glsi06g0345 | Glsi-ChrGlsi06 | 2830602 | 2833293 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Glsi06g0345 | 41 | 183 | Cytoplasmic Ribosomal Protein Gene Family | AT4G29410 | 77.622 | 1.49e-78 | 229 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Glsi06g0345 | 06 | 2830602 | 2833293 | Glsi07g0389 | 07 | 2727070 | 2730885 | CCT | |
Glsi07g0389 | 07 | 2727070 | 2730885 | Glsi06g0345 | 06 | 2830602 | 2833293 | ECH | |
Glsi06g0345 | 06 | 2830602 | 2833293 | Glsi06g0345 | 06 | 2830602 | 2833293 | ECH |