Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0345 ATGAATTCAGGTTGTTTCAGAGGTTCAATAACATTTTATCCTTATTGTACTCGAATGTTGACACAAACAGGTCCCTTTCCTCGCAACTTTGAGAAGCGGAAGCCAACAGGGAAAGAGAAGATGGCCACAGTACCAGGGCAGCTCATATGGGAGATCGTGAAGAGGAACAACTCTTTCTTGGTGAAAGAGTTTGGTAGGGGCACTCAGAGCGTGCAGTTCAGCAAAGAGAGCAACAATCTCTACAACCTCAACTCTTTCAAGCACTCTGGTTTGGCAAACAAGAAGACCGTTACTATTCAACCTGGGGGCAAAGATCAATCTGTGTTGCTGGCGACGACCAAGACAAAGAAACAGAACAAGCCTGCTGCTTTACTTCATAAATCTGTCATGAAAAAGGAGTTCCGAAGGATGGCAAAGTCTGTGGAAAACCAGGTGGCAGATAACTACTACAGGCCTGATCTTAAGAAGGCAGCCCTTGCAAGGTTGAGTGCTGTTAATAGGAGCCTTAGAGTTGCGAAATCTGGTGTGAAGAAGAGGAACAGACAGGCTGTGAAGGTCCATGGTAGAAAGTGA 573 0.4555 MNSGCFRGSITFYPYCTRMLTQTGPFPRNFEKRKPTGKEKMATVPGQLIWEIVKRNNSFLVKEFGRGTQSVQFSKESNNLYNLNSFKHSGLANKKTVTIQPGGKDQSVLLATTKTKKQNKPAALLHKSVMKKEFRRMAKSVENQVADNYYRPDLKKAALARLSAVNRSLRVAKSGVKKRNRQAVKVHGRK 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0345 190 Gene3D - 46 173 - -
Glsi06g0345 190 PANTHER 60S RIBOSOMAL PROTEIN L28 41 190 IPR002672 GO:0003735|GO:0005840|GO:0006412
Glsi06g0345 190 FunFam 60S ribosomal protein L28 45 173 - -
Glsi06g0345 190 Pfam Ribosomal L28e protein family 48 168 IPR029004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0345 Glsi-ChrGlsi06 2830602 2833293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0345 41 183 Cytoplasmic Ribosomal Protein Gene Family AT4G29410 77.622 1.49e-78 229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g0345 06 2830602 2833293 Glsi07g0389 07 2727070 2730885 CCT
Glsi07g0389 07 2727070 2730885 Glsi06g0345 06 2830602 2833293 ECH
Glsi06g0345 06 2830602 2833293 Glsi06g0345 06 2830602 2833293 ECH