Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0333 ATGTGGCGACTAATTTTATATTTTGATTATTCAGTGTGCCATTCCGGCATCCGCATTGCTCTACTTAAAATAAATTATGGCTTTTTAATTCGGAAACTGCATAGTCGGAACCGGACCGCTTCGGGAAACAGACCCGTATACCTCGAGCTTGGAATGGCGACACCACCAATGCCGCCGCCCGGAAACCCGATGTTCGACGGAGGTCTGCCACCGGCTCCACAACCTCCGGGTACGGATATGACTGGAATATGCTTCAGAGACCAGCTCTGGCTCAACACCTACCCTCTCGATCGCAACCTAGTGTTCGATTACTTCGCGTTATCTCCCTTCTATGACTGGACCTGCAATAATGAACAGCTCCGGATGCGCTCTATTCACCCCCTTGATATCTCTCAATTATCGAAAATGACAGGCACAGAGTATATGCTCAGTGAAGTTATGGAGCCTCATCTTTTTGTTATTCGCAAGCAAAAGAGAGATGGCCCTGAGAAAGTTACGCCAATGCTGGCATATTACATCTTGGATGGTTCAATATACCAGGCACCACAACTAGGCAATGTTTTTGCAGCTCGAATTGGAAGGGCACTGTATTATATACAAAAGGCTTTTACTACAGCTGCCTCAAAGTTAGAGAAGATAGGATATGCTGATTCTGAAAATGAGACTGCAGTTGTGGAATCCAAGGTTGCCAAAGAGACAATAGACTTCAAGGAAGTTAAGCGAGTGGATCACATTCTTGCATCTGTACTGCGAAAGCTACCACCAGCTCCAGCTCCACCACCATTTCCGGAAGGCTATATTCCGCCTGCAACTGCAGAAACTGAGAAAGGCCCTGAATCTCAGGAAGCAACAGATTCCCAAACTCCTTCTGTTGATCCGATAATTGATCAAGGTCCAGCGAAAAGAATGAAACTTTGA 918 0.4608 MWRLILYFDYSVCHSGIRIALLKINYGFLIRKLHSRNRTASGNRPVYLELGMATPPMPPPGNPMFDGGLPPAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDISQLSKMTGTEYMLSEVMEPHLFVIRKQKRDGPEKVTPMLAYYILDGSIYQAPQLGNVFAARIGRALYYIQKAFTTAASKLEKIGYADSENETAVVESKVAKETIDFKEVKRVDHILASVLRKLPPAPAPPPFPEGYIPPATAETEKGPESQEATDSQTPSVDPIIDQGPAKRMKL 305
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0333 305 Gene3D Mediator complex, subunit Med6 77 206 IPR038566 -
Glsi06g0333 305 Pfam MED6 mediator sub complex component 83 208 IPR007018 GO:0003712|GO:0006357|GO:0016592
Glsi06g0333 305 MobiDBLite consensus disorder prediction 256 305 - -
Glsi06g0333 305 FunFam Mediator of RNA polymerase II transcription subunit 6 77 206 - -
Glsi06g0333 305 PANTHER MED-6-RELATED 64 305 IPR007018 GO:0003712|GO:0006357|GO:0016592
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi06g0333 Glsi-ChrGlsi06 2765917 2770974 Transposed
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED6 Glsi06g0333 Med6 1.2e-40 No_clan