Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0324 ATGGCATTCTCTGGAGGTCGGGTAAGGGATGATGGTTTTGGGGTGAGGCAATTTCGGGAGTCAGACGATGTTGACGCTATCATGAAAATTAAAAGTACTTATGGGCTCTCCAGAATCAGCTGGCAAGGTGACCCCTGTGTTCCATCTAACTTTACATGGGATGGTTTAAATTGTAGCTCTGGCAACAATTCAAGGATCATTTCATTGAACCTGAGATCAAGCAAACTGACAGGACAAATAGCTACTTCATTTGCCAATCTGGAAAAATTGCAGTCCTTGGATTTGTCAAACAATGAATTGACTGGACAACTACCAGAATTTCTTGCAGATCTTCCTAATTTGAAATTCCTTAATTTGACAGGAAATAAGCTCACAGGTTCAATTCCCAAGGCTCTGAGGGAAAAGGCTGATTTGCAGCTGAGTGTGGCCGACAATCCAAGTCTCTGTCAGAAGTATTCATGCAAAGAGCACAAGTTTGTAATTCCACTTATTGCATCAATTGCAATTTTGGTCATAATTGCCCTTGTTTCTTTATTGATCTGGAGACTCAGAAAGAAAAGACTAGTGTTGCCTACTGAATCTCAAAAGAAGGAAGTTTTGAAACAAAAGAGTCGAGCATTTTCTTACTCTCAAATTCTCCGTATCACAAACAATTTCGAAACTGTTATTGGAGAAGGAGGATTTGGAAAAGTTTACCTTGGCACTTTAGAAGATGATACTCAAGTTGCGATTAAGTTACTTTCTCCATCATCGAGGCAAGGATATAAGGAATTCCAATCAGAGGCTCAACTCTTAATGGTTATTCACCATAGAAACTTGGTTTCACTCGTTGGGTATTGTGATGAAGGCGATGTCAAGGCATTGATCTATGAATATATGGATAATGGCGATCTCAACCATCTATTATCAGAGAGAAACCCAAATGTTTTGAAGTGGAATGAGAGACTTCATGTTGCAGCGGATGCAGCAAAAGGACTGGAATATCTGCATAATGGTTAGATTCTCATCTATCAACTCAACCAGCTGGGACACCTGGTTACATTGATCCTGAATTTCAAAGATCTGGAATCCTAA 1074 0.3976 MAFSGGRVRDDGFGVRQFRESDDVDAIMKIKSTYGLSRISWQGDPCVPSNFTWDGLNCSSGNNSRIISLNLRSSKLTGQIATSFANLEKLQSLDLSNNELTGQLPEFLADLPNLKFLNLTGNKLTGSIPKALREKADLQLSVADNPSLCQKYSCKEHKFVIPLIASIAILVIIALVSLLIWRLRKKRLVLPTESQKKEVLKQKSRAFSYSQILRITNNFETVIGEGGFGKVYLGTLEDDTQVAIKLLSPSSRQGYKEFQSEAQLLMVIHHRNLVSLVGYCDEGDVKALIYEYMDNGDLNHLLSERNPNVLKWNERLHVAADAAKGLEYLHNGXILIYQLNQLGHLVTLILNFKDLES 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0324 357 Gene3D Ribonuclease Inhibitor 24 151 IPR032675 -
Glsi06g0324 357 SUPERFAMILY L domain-like 43 133 - -
Glsi06g0324 357 Pfam Protein tyrosine and serine/threonine kinase 219 332 IPR001245 GO:0004672|GO:0006468
Glsi06g0324 357 Gene3D Transferase(Phosphotransferase) domain 1 195 356 - -
Glsi06g0324 357 PRINTS Leucine-rich repeat signature 90 103 - -
Glsi06g0324 357 PRINTS Leucine-rich repeat signature 111 124 - -
Glsi06g0324 357 FunFam Leucine-rich repeat receptor-like protein kinase 195 292 - -
Glsi06g0324 357 ProSiteProfiles Leucine-rich repeat profile. 89 112 IPR001611 GO:0005515
Glsi06g0324 357 SUPERFAMILY Protein kinase-like (PK-like) 199 331 IPR011009 -
Glsi06g0324 357 FunFam Leucine-rich repeat receptor-like kinase 22 151 - -
Glsi06g0324 357 Pfam Leucine rich repeat 68 124 IPR001611 GO:0005515
Glsi06g0324 357 PANTHER OS07G0107800 PROTEIN-RELATED 20 332 - -
Glsi06g0324 357 ProSitePatterns Protein kinases ATP-binding region signature. 223 245 IPR017441 GO:0005524
Glsi06g0324 357 ProSiteProfiles Protein kinase domain profile. 217 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0324 Glsi-ChrGlsi06 2216429 2221519 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0324 11 332 Receptor kinase-like Gene Family AT1G51850 47.025 1.93e-100 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Glsi06g0324 PK_Tyr_Ser-Thr 1.6e-24 CL0016