Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0323 ATGAACGTCTATAGTAGAGAAGCACTTGTTCTGCTCTTAGCATTTTTCTTTCTCACAAGAGGGGATGCACAAGATACCCTTGTGCCAGCAATCATAACATTTGGTGATTCTGCAGTAGATGTGGGGAATAATGACTATTTGCCCACTCTTTTCAAGGCAGATTATCCTCCTTATGGAAGGGACTTTGTGAACCATCAACCAACAGGAAGATTTTGCAATGGAAAATTGGCTACCGATATTACTGCTGAAACACTGGGCTTTAAGAGTTATGCACCTGCATATCTTAGCCCACAGGCATCAGGGAAGAACCTTCTTGTTGGAGCAAATTTTGCTTCAGCTGCCTCTGGTTATGATGAGAAAGCTGCTATTTTGAATCATGCGATACCATTGTCTCAACAGCTAAATTATTACAAGGAATACCAAGGCAAGCTTTCCAAGGTAGCTGGCAGTAAAAAAGCAGAATCAATTATCAAGAATGCGTTGTACATATTGAGTGCTGGAAGTAGTGACTTTGTGCAAAATTACTATGTTAATCCTTGGATCAACAAAGCCTACACTCCTGATCAGTATTCCTCATACCTTGTGGGATCATTCTCAAGCTTTATTAAGGACTTGCATGGATTGGGAGCCAGGAAAATTGGAGTGACATCACTCCCACCATTGGGTTGCCTACCTGCTGCAAGAACTTTATTTGGATTTCACGAAAATGGATGTGTGTCAAGGATCAACACTGATGCCCGAGGATTTAACAAAAAGATCAGCTCAGCTGCAGCAAATCTCCAAAGGCAACTTCCTGGTCTTAAGATAGTTATCTTTGACATCTTCAAGCCTCTCTATGACCTTGTGCAATCGCCTTCAAAATACGGTTTCGCGGAGGCAAGGAAAGGTTGCTGTGGGACTGGGCTTGTAGAGACAACATCATTATTGTGCAATCCAAAATCACCAGGAACTTGTTCTAATGCAACCCAGTATGTGTTTTGGGACAGCGTCCATCCTTCTCAAGCTGCTAACCAGGTTCTTGCCGATGCATTGATTTCACAAGGCATTGGTCTTATCTCTTAA 1062 0.4228 MNVYSREALVLLLAFFFLTRGDAQDTLVPAIITFGDSAVDVGNNDYLPTLFKADYPPYGRDFVNHQPTGRFCNGKLATDITAETLGFKSYAPAYLSPQASGKNLLVGANFASAASGYDEKAAILNHAIPLSQQLNYYKEYQGKLSKVAGSKKAESIIKNALYILSAGSSDFVQNYYVNPWINKAYTPDQYSSYLVGSFSSFIKDLHGLGARKIGVTSLPPLGCLPAARTLFGFHENGCVSRINTDARGFNKKISSAAANLQRQLPGLKIVIFDIFKPLYDLVQSPSKYGFAEARKGCCGTGLVETTSLLCNPKSPGTCSNATQYVFWDSVHPSQAANQVLADALISQGIGLIS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0323 353 Gene3D SGNH hydrolase 19 348 IPR036514 -
Glsi06g0323 353 CDD SGNH_plant_lipase_like 29 346 IPR035669 -
Glsi06g0323 353 PANTHER GDSL ESTERASE/LIPASE EXL3 16 344 - -
Glsi06g0323 353 FunFam GDSL esterase/lipase APG 20 349 - -
Glsi06g0323 353 SUPERFAMILY SGNH hydrolase 31 345 - -
Glsi06g0323 353 Pfam GDSL-like Lipase/Acylhydrolase 31 343 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0323 Glsi-ChrGlsi06 2208985 2210396 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0323 5 345 Pollen Coat Proteome AT1G75910 35.174 1.55e-64 206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g0323 06 2208985 2210396 Glsi06g0323 06 2208985 2210396 ECH