Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0319 ATGGGCAAGGCTACGAGGTGGTTGAAGGGCTTGTTGGGGATGAAGAAAGAGAAGGATCACAGTGACAATTCAGGCTCATTGGCTCCTGACAAGAAGGAGAAGAAACGTTGGAGTTTCGCCAAGTCAGGGAAGGATCCCGGTGTTGTGGGTCACACTGGTTTTCCTCCCGCTGATTCTGCTTGGCTCAGATCCTATATTACTGAAACAGAGAAAGAGCAGAACAAGCACGCAATTGCTGTGGCTGCTGCCACAGCCGCTGCCGCCGATGCTGCTGTGGCTGCTGCACAGGCAGCCGTGGCCGTTGTAAGGCTTACAAGCCATGGCAGGGGCACTCTGTTTAGTGGGAGTAGAGAGAAATGGGCTGCAGAGAAGATTCAGACTGTTTTCAGAGGTTATTTGGCCCGAAAGGCACTAAGAGCTCTCAGAGGATTGGTTAAGATCCAGGCTCTTGTTAGAGGCTATCTAGTTCGAAAGAGAGCTGCTGCAACTCTTCATAGCATGCAAGCTCTTATAAGAGCTCAGGTTTCTGTCAGATCACAGCGAGCTCGTCGTTCCATCAGCAAAGACAATAGATTTCAACCCGAAATCCGGGCTAGAAAATCTGTGGAACGAGGTGATGAAAAAAGGAGTGAATTCCACAGCAAAAGGATATCAACATCTTATGAACCTTCCTTCAATGGGTTCGATGAAAGCCCGAAAATTGTTGAGATTGACACATACAGGACCCAATCAAGATCAAGGCGCATTGCCACGACGTTGTCAGAATGTGGATGTGGAGAAGAACTTCCCTGTCAAGCATTTCCTGATTTTAGGCAACTTCAAGACTTTGAATGGTGCTTCAATGGCGATGAATGTAGATTCTCCACAGCTCAGAGCACTCCTCGTTTTGCCAACTGTGTGCGAGCCCATGCTCCTGCTACGCCAGCCAAGAGTGTTTGTGGTGATACCTTCTTCCGTCCTGACTCTAATTTCCCCAATTACATGTCCAACACACAGTCTTTCAACGCAAAACTAAGGTCTCACAGTGCCCCAAAGCAAAGACCAGAACCCAAGAAAAGGCTCTCACTCAATGAAATCATGGCAGCTAGAAACAGCATAAGCAGCGTTAGAATGCAGAGGTCATCCTGTTCCCCAGTTCAAGAATCATGGAATTTGTGA 1158 0.4801 MGKATRWLKGLLGMKKEKDHSDNSGSLAPDKKEKKRWSFAKSGKDPGVVGHTGFPPADSAWLRSYITETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRGTLFSGSREKWAAEKIQTVFRGYLARKALRALRGLVKIQALVRGYLVRKRAAATLHSMQALIRAQVSVRSQRARRSISKDNRFQPEIRARKSVERGDEKRSEFHSKRISTSYEPSFNGFDESPKIVEIDTYRTQSRSRRIATTLSECGCGEELPCQAFPDFRQLQDFEWCFNGDECRFSTAQSTPRFANCVRAHAPATPAKSVCGDTFFRPDSNFPNYMSNTQSFNAKLRSHSAPKQRPEPKKRLSLNEIMAARNSISSVRMQRSSCSPVQESWNL 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0319 385 MobiDBLite consensus disorder prediction 1 52 - -
Glsi06g0319 385 Pfam Protein of unknown function (DUF4005) 305 370 IPR025064 -
Glsi06g0319 385 Pfam IQ calmodulin-binding motif 145 159 IPR000048 GO:0005515
Glsi06g0319 385 Pfam IQ calmodulin-binding motif 124 139 IPR000048 GO:0005515
Glsi06g0319 385 ProSiteProfiles IQ motif profile. 142 169 IPR000048 GO:0005515
Glsi06g0319 385 Gene3D - 117 160 - -
Glsi06g0319 385 PANTHER IQ-DOMAIN 5-RELATED 1 357 - -
Glsi06g0319 385 ProSiteProfiles IQ motif profile. 118 146 IPR000048 GO:0005515
Glsi06g0319 385 SMART iq_5 140 161 IPR000048 GO:0005515
Glsi06g0319 385 SMART iq_5 117 139 IPR000048 GO:0005515
Glsi06g0319 385 MobiDBLite consensus disorder prediction 10 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0319 Glsi-ChrGlsi06 2184056 2185896 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0319 1 371 IQD Protein Family AT3G16490 59.585 3.61e-119 349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g0319 06 2184056 2185896 Glsi06g0319 06 2184056 2185896 ECH