Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0283 ATGATGGCTGGAAACCCTAACTGGTGGAGCATGCATCCACCAACTTTGATCCCTCCTCAGTATGTGCTTGGATCTTCTTCAATTCCTTTGAATTTTTTGACAGACACCAAAGAACCTCCTCAGTCATGGAGCCAACTGCTTTTCACTGGATTACCTGGAGAAGAAGAGAGACTGGGTTTCAGTCATTTTCAAACAAAAAAGTTGGAAAATTGGGATGACCAGGTTGTTAATCCATCCTCACTAGTTCCCGTCCTTGATATAATAAAGCAGGAGGTATCCCATAGTGGCAACATGTACGGCCATGGGAATGAAGAGGAATTTCTGGCTTCTGGACCTCCTGCCTCATATTGGTCCAATATGGTGTCTGCAGTTTCTTCCCCTAAGTCTCGTGTCACTAGCTTAAGTAATCCAAATATATTGGATTTCACTTATAACAAGGCAGATGATAGGAAGAATCAACTATCAGATAATAACCCATCTCAGTGTAATAATAGCACGGCGACTGCTGGAGTTTGTAAGAAGGCTAGAGTTCAGCCATCTTCAAACCAACCTCCTCTGAAGGTGAGAAAGGAGAAGCTAGGTGATAGAATAACAGCCCTTCACCAGCTAGTTTCCCCATTTGGAAAGACTGACACAGCTTCTGTCTTGTTAGAAGCCATTGGGTATATTAGATTCCTTCAAGGCCAAATTGAGGTGATGTTTCTCCCACAATATACCCCTGCAAGCTCTTCAGAGTCAGCACTCAGTTCCCCTTACTTGGCCAATGCATCAAAAAACATGAGGAATCAGCACTCTGTTCATGGAGAAAGGAATTCTGTATTTCCTGAGGACCCGGGTCAGCTCTTGAATGACACTGGCCTGAAAAGAAAAGGAGTTTCAAACCAGGATGCAGAAGAAAAGCCTAAGGACCTGAGGAGTAGAGGATTATGCTTGGTGCCTGTGTCCTGCACCCAACATGTTGGAAGTGAAAATGGAGCAGATTACTGGGCACCAACATATGGCAGCGGATTTTAA 1014 0.4408 MMAGNPNWWSMHPPTLIPPQYVLGSSSIPLNFLTDTKEPPQSWSQLLFTGLPGEEERLGFSHFQTKKLENWDDQVVNPSSLVPVLDIIKQEVSHSGNMYGHGNEEEFLASGPPASYWSNMVSAVSSPKSRVTSLSNPNILDFTYNKADDRKNQLSDNNPSQCNNSTATAGVCKKARVQPSSNQPPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEVMFLPQYTPASSSESALSSPYLANASKNMRNQHSVHGERNSVFPEDPGQLLNDTGLKRKGVSNQDAEEKPKDLRSRGLCLVPVSCTQHVGSENGADYWAPTYGSGF 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0283 337 CDD bHLH_AtbHLH_like 187 233 IPR045239 -
Glsi06g0283 337 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 177 226 IPR011598 GO:0046983
Glsi06g0283 337 MobiDBLite consensus disorder prediction 260 303 - -
Glsi06g0283 337 Gene3D - 187 236 IPR036638 GO:0046983
Glsi06g0283 337 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 74 319 - -
Glsi06g0283 337 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 187 235 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0283 Glsi-ChrGlsi06 1943488 1945989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0283 1 281 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 35.920 1.37e-40 144