Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0258 ATGAATCAAATGGCTCTTAAGCCATACCAATTTGTTCTTGATCTACACTCCATCGGCAGCTTATTCGCTTCCAGAAAAGCCCAGCTAGGGCCCAAAAAGAAAAAGAAAAGGCCGGGCTCACTACAGAACCTGTGGCCTTGCCTTTTGCGATCCCCCGCCGGACTCAACCCTAAACCTTCTTTTTCGCGCTCTCATATAAATCATCCTCTGAACACCACTTCATTTTTCTTCAATCTTCGGCTAGATACTTCCTCAGCTGCATCTAGGGTTTCTTCGTCTGCTTCAATGGGGAAGGGGACGGGGAGCTTCGGTAAGCGGAGGAACAAGACCCACACTCTCTGTCTGAGGTGTGGTCGCCGCAGCTTTCACCTCCAGAAGAGTCGCTGCTCCGCCTGTGCTTACCCTGCTGCCCGCATGAGGAAATATAACTGGAGTGTCAAGGCAATCCGTAGAAAGACCACGGGAACGGGTAGGATGAGGTACTTGCGAAATGTGCCTCGGAGATTCAAGAGCGGCTTCAGAGAAGGTACTCAAGCTGCACCCAGGAATAAGGGAGCAGCTGCCACTGCATAA 573 0.5113 MNQMALKPYQFVLDLHSIGSLFASRKAQLGPKKKKKRPGSLQNLWPCLLRSPAGLNPKPSFSRSHINHPLNTTSFFFNLRLDTSSAASRVSSSASMGKGTGSFGKRRNKTHTLCLRCGRRSFHLQKSRCSACAYPAARMRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTQAAPRNKGAAATA 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0258 190 PANTHER 60S RIBOSOMAL PROTEIN L37 96 189 - -
Glsi06g0258 190 MobiDBLite consensus disorder prediction 170 190 - -
Glsi06g0258 190 Hamap 50S ribosomal protein L37e [rpl37e]. 97 148 IPR001569 GO:0003735|GO:0005840|GO:0006412
Glsi06g0258 190 Pfam Ribosomal protein L37e 98 148 IPR001569 GO:0003735|GO:0005840|GO:0006412
Glsi06g0258 190 ProSitePatterns Ribosomal protein L37e signature. 99 118 IPR018267 GO:0003735|GO:0005840|GO:0006412
Glsi06g0258 190 Gene3D - 96 182 IPR011331 GO:0003735|GO:0005840|GO:0006412
Glsi06g0258 190 FunFam Ribosomal protein L37 96 182 - -
Glsi06g0258 190 SUPERFAMILY Zn-binding ribosomal proteins 96 150 IPR011332 GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0258 Glsi-ChrGlsi06 1771978 1773572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0258 96 190 Cytoplasmic Ribosomal Protein Gene Family AT1G52300 87.368 3.82e-58 176