Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0256 ATGAACGGTGCTGGGAGGCAGGGGCAGAGATCTGGTGCGACGGGGGTGCACCACCAGCGCCAGTACTCAGACAACTTTCTGGATAGCTCCTCCAATGGGAGGTGGCTCCAGTCTGCTGGTCTTCAACACCTTCAATCATCTGGCAATTCCATTCCTCCCCTTCAGGACTATAACTTCTTTGGTGGGGGAGGGCAGGGAACACGAATGTTTAGGAATGCGCAAAGGAGCTTTAATGGGGGGAATGAGTATTATATGGAGCCCTCCACACCCCCAGGTAATTATCGGTATTCAAACCAAAGAAAGAATGGTGAAGATTCACCCGGTGATTTCAGCCCAGGGCTGTTGGATCTGCATTCATTTGATACGGAGCTTCTTCCTGAGATTCCAGTTTCCAATGTATTTGATGGTACCTCAATGTATCATCCTGTTCGGGGTAGAAGAAGCTTTGATGACTCTGAACCCTACATTTCGAACAAACAGGCAGGTAGAGCTCGTGCTCCTGAAAACAATCTCCTCAAAAGTTTTTCTGCAGACAAAGAGAAATCTAGTTCTGTAGCAAAGATTAAAGTTGTGGTTCGCAAGAGACCACTCAATAAGAAGGAATTAGCAAAGAATGAGGAAGATATTATAGATACACACTCCAATTCTTTAACAGTACATGAGACTAAGCTTAAGGTTGACCTAACTCAGTATATAGAAAAGCACGAATTTGTCTTTGATGCGGTCTTGAATGAAGAGGTTACGAATGATGAGGTCTATCATGAAACAGTGGAGCCCATAGTTCCGATAATCTTTCAACGCACCAAGGCAACTTGCTTTGCTTATGGACAAACAGGTAGTGGAAAAACGTACACAATGAAGCCACTGCCGCTTAAAGCATCAAGGGACATCTTGAGATTGATGCACCATACTTACAGGAACCAGGGATTTCAGTTGTTTGTGAGTTTCTTTGAAATATATGGCGGAAAGCTTTTTGATCTCCTTAACGATCGAAAAAAACTTTGCATGAGGGAGGATGGTAAACAGCAAGTTTGCATTGTGGGTTTGCAAGAGTACAAAGTATCGGATGTGGAGAACATCAAGGATCTGATAGAGAAAGGAAATGCCACAAGAAGTACAGGCACCACGGGAGCAAATGAAGAATCTTCACGTTCTCATGCAATACTTCAGCTTGCTATCAAGAGGTCTGCTGATGGCAATGCATCCAAGCCTCCCCGTGTTGTTGGCAAGCTCTCCTTCATAGATCTTGCAGGAAGTGAACGTGGTGCAGATACCACAGATAATGACAAACAGACAAGAATTGAAGGTGCTGAGATCAATAAGAGCTTACTTGCCTTGAAAGAATGCATAAGAGCCCTTGATAACGATCAGGGACACATCCCTTTCAGAGGCAGTAAACTGACTGAAGTTTTGAGGGATTCATTTGTTGGCAATTCGCGCACTGTTATGATATCCTGCATATCACCAGGCTCCGGTTCATGTGAACATACTCTTAATACATTACGATATGCTGACAGGGTGAAAAGCCTGTCCAAAGGGAACAACCCTAAAAAGGATGTTTTATCTTCAAATTTCAACATAAAAGAATCAACTACCATTCCTTTGCCTTCGGTTCCCGCATCAGCCTTGGAGGATCGCACAGCTGATGCATGGCCAGAAGAAAATGATGAAGATGAGTTTAGTCCATCCGAAGAGTACTATGAGCAGGGGAAACCATCTTGGAAGAAAAATGGAAAGATAGAACCATATGGTACCTCTGAGGACAAGTTAAAGAAACCCAATGGTCAAATCAAATGGAAGGACCTCCCAAAAGTAGAATCTGCTACTGCACATTCAGACAACGATTTAAATGCCCTCTTACAGGAAGAGGAGGACCTTGTAAATGCGCACCGGAAACAAGTAGAGGAGACCATGAACATTGTTAGAGAGGAGATGAACCTCTTGGTTGAAGCCGAACAACCAGGGAATCAACTAGATAGTTATATAACAAGATTAAATGCCATTCTATCTCAGAAGGCTGCTGGCATCCTCCAATTACAAAATCGTTTAGCTCATTTCCAGAAACGATTAAAGGAGCATAATGTGTTGGTTTCTTCTGCTGGTTACTAA 2109 0.4339 MNGAGRQGQRSGATGVHHQRQYSDNFLDSSSNGRWLQSAGLQHLQSSGNSIPPLQDYNFFGGGGQGTRMFRNAQRSFNGGNEYYMEPSTPPGNYRYSNQRKNGEDSPGDFSPGLLDLHSFDTELLPEIPVSNVFDGTSMYHPVRGRRSFDDSEPYISNKQAGRARAPENNLLKSFSADKEKSSSVAKIKVVVRKRPLNKKELAKNEEDIIDTHSNSLTVHETKLKVDLTQYIEKHEFVFDAVLNEEVTNDEVYHETVEPIVPIIFQRTKATCFAYGQTGSGKTYTMKPLPLKASRDILRLMHHTYRNQGFQLFVSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYKVSDVENIKDLIEKGNATRSTGTTGANEESSRSHAILQLAIKRSADGNASKPPRVVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPGSGSCEHTLNTLRYADRVKSLSKGNNPKKDVLSSNFNIKESTTIPLPSVPASALEDRTADAWPEENDEDEFSPSEEYYEQGKPSWKKNGKIEPYGTSEDKLKKPNGQIKWKDLPKVESATAHSDNDLNALLQEEEDLVNAHRKQVEETMNIVREEMNLLVEAEQPGNQLDSYITRLNAILSQKAAGILQLQNRLAHFQKRLKEHNVLVSSAGY 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0256 702 Coils Coil 676 696 - -
Glsi06g0256 702 MobiDBLite consensus disorder prediction 569 593 - -
Glsi06g0256 702 ProSitePatterns Kinesin motor domain signature. 409 420 IPR019821 GO:0003777|GO:0005524|GO:0007018
Glsi06g0256 702 PANTHER KINESIN-RELATED PROTEIN 6 30 558 IPR027640 GO:0003777|GO:0007018
Glsi06g0256 702 FunFam Kinesin-like protein 168 513 - -
Glsi06g0256 702 MobiDBLite consensus disorder prediction 550 593 - -
Glsi06g0256 702 PRINTS Kinesin heavy chain signature 460 481 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi06g0256 702 PRINTS Kinesin heavy chain signature 267 288 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi06g0256 702 PRINTS Kinesin heavy chain signature 410 428 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi06g0256 702 PRINTS Kinesin heavy chain signature 376 393 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi06g0256 702 SMART kinesin_4 185 516 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi06g0256 702 Pfam Kinesin motor domain 193 509 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi06g0256 702 Coils Coil 620 651 - -
Glsi06g0256 702 ProSiteProfiles Kinesin motor domain profile. 187 510 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi06g0256 702 MobiDBLite consensus disorder prediction 91 105 - -
Glsi06g0256 702 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 510 IPR027417 -
Glsi06g0256 702 Gene3D Kinesin motor domain 166 513 IPR036961 -
Glsi06g0256 702 MobiDBLite consensus disorder prediction 1 28 - -
Glsi06g0256 702 CDD KISc_KIF2_like 187 508 - -
Glsi06g0256 702 MobiDBLite consensus disorder prediction 78 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0256 Glsi-ChrGlsi06 1763248 1768917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0256 187 522 Calmodulin-binding Proteins AT5G65930 34.971 8.95e-45 171