Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0253 ATGGATTTCTGGCCAGAATTTCTTGCAAGAAGCTGGGGTAGAGAATTTGTTGCCGGAGGCTTTGGGGGCATTGCTGGTATAATATCTGGTTATCCGCTCGACACACTCCGCATCCGGCAACAGAGCTCAAACACCGGCTCTGCTTTCAGCATCCTCAGACATGTGGTGGACAAGGAAGGACCGGCTGCTCTGTACCGAGGCATGGCTGCACCTTTAGCCTCTGTTACTTTTCAGAATGCTATGGTTTTCCAAATTTATGCAGTCTTTTCGAGAGCATTTGACAAATCGTTTTCATCTAATGATCCTCCTTCCTACAAGGGTGTTGCTTTAGGAGGATTTAGCACAGGTGCTGTACAAAGCTTACTTCTTTCCCCAGTAGAGTTGGTTAAAATTCGGCTTCAGCTTCAGAACACAGCCAAATTGCCAGAATCTCATAAGGGTCCTGTAGAGGTGACTAAGAACATATGGAGAAAGGAGGGTCTTCGGGGTATATATCGAGGGCTAGGCATCACTGTGCTCAGAGATGCACCTTCCCATGGTTTCTACTTCTGGACCTATGAATACATGAGGGAACAACTTCACCCTGGTTGCCGAAAAAGCAGTCAAGAAAGCTTGAACACTATGCTAGTTGCTGGAGGATTAGCTGGGGTGGCGAGCTGGATTTGTTGCTACCCTTTGGATGTTATGAAGACGAGACTCCAGGCTCAAACACCATCTTCGGTGAAATACAAAGGCATTCTGGATTGCCTCAGAAAGAGCATTAAAGAAGAAGGGTACGGTGTGCTATGGCGGGGTTTAGGAACTGCTGTTGCTAGAGCGTTTGTGGTGAATGGAGCTATATTTTCTGCTTATGAGGTTGCTCTGAGGTGCTTGTTTAGCAATGGAAGTATTCCGATGGAGGAAATAATTTAG 912 0.4649 MDFWPEFLARSWGREFVAGGFGGIAGIISGYPLDTLRIRQQSSNTGSAFSILRHVVDKEGPAALYRGMAAPLASVTFQNAMVFQIYAVFSRAFDKSFSSNDPPSYKGVALGGFSTGAVQSLLLSPVELVKIRLQLQNTAKLPESHKGPVEVTKNIWRKEGLRGIYRGLGITVLRDAPSHGFYFWTYEYMREQLHPGCRKSSQESLNTMLVAGGLAGVASWICCYPLDVMKTRLQAQTPSSVKYKGILDCLRKSIKEEGYGVLWRGLGTAVARAFVVNGAIFSAYEVALRCLFSNGSIPMEEII 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0253 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 92 IPR018108 -
Glsi06g0253 303 Gene3D Mitochondrial carrier domain 13 294 IPR023395 -
Glsi06g0253 303 SUPERFAMILY Mitochondrial carrier 12 285 IPR023395 -
Glsi06g0253 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 103 192 IPR018108 -
Glsi06g0253 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 203 290 IPR018108 -
Glsi06g0253 303 FunFam Mitochondrial arginine transporter BAC2 11 301 - -
Glsi06g0253 303 Pfam Mitochondrial carrier protein 207 293 IPR018108 -
Glsi06g0253 303 Pfam Mitochondrial carrier protein 110 193 IPR018108 -
Glsi06g0253 303 Pfam Mitochondrial carrier protein 11 96 IPR018108 -
Glsi06g0253 303 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085
Glsi06g0253 303 PRINTS Mitochondrial carrier protein signature 118 136 IPR002067 GO:0055085
Glsi06g0253 303 PRINTS Mitochondrial carrier protein signature 165 183 IPR002067 GO:0055085
Glsi06g0253 303 PRINTS Mitochondrial carrier protein signature 212 234 IPR002067 GO:0055085
Glsi06g0253 303 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 11 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0253 Glsi-ChrGlsi06 1756810 1758859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0253 1 298 Antiporters AT1G79900 74.247 1.07e-152 427