Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0244 ATGGAGCATACCATAGTTGATGCCTTATTGTTGAGGGAAGTTGTAGGAAAGAAGAGGAGCGAGGTTGGTGAACTGAGGAGTGAGGAAGTGAAACTTTTTCACCAAACCAAAGAGAAGGAGAGAATGGCAGAATTCGCTGATTTCAAAGTCCAAGGAGAGAAAACTATGGATGCAAATGGTCCTTTTTCAGAAGACAAATGCAAAGAACGTGCTTATAGGAAGTCGGCAAAAAGTGAGGATACGGCTCATTGTTTGGTGAATGCAGAAAGCAGGAGGTGGTTATGGTTCATTGTGGTAGGAGGAGTTGTCACTGAAACCGTAAGGGAAGATGGACTTTTGTTTCGTCCTATCTCTCAAGTTCAAAAAACTTCCCGTCAGGGGAATAGAAAAGATAGCAAGATCCCATCATGGAAACCCAGACATTCAGCTTTAAAAACATTGGTCCTGCAGCAAACAACAACTCGGTTGCAAATAAATTGGAAGAGCAAGGCTTTGAGCAAATTTTTAAGTGATAGTTGCATGAAGTTAGTGAAACTGAAACCTAGCTCAGGTTGCTCTGTTTTGGATTCTTACACAGGGGTTTCAGGGGCTACATTTACACTTGTGAATAAGTGTGACTACCCAGTATGGCCAGGGATTTTAGCACAGGAAGGCTCATGCGCGACCACCGGTTGCGTGGCGGATCTCAACAGCCAGTGCCCGCCCGAATTAAGGGCCGACGGTGGCAATGGCTGTAAGAGTGCTTGTGGTGCGTTTGGGAAACCTGAGTATTGCTGCAACGGGTCATACAGTTCCTCTTCCGCGTGTAAGCCCTCCAATTACTCTGAGATGTTCAAGTCGGCGTGTCCAAGAGCCTATAGCTACGCCTTTGATGATCCCACCAGTACCTTTACTTGTTCAGGAGCTAACTATACAGTCACATTTTGTGCTGCTACTCTCCCAGGGTTTACAGGAGATTCTGGGGAACAAGGGCGACACAAACACAAAGGAGGTCTCCTTGGAAAAGTTGACTACCAACACAAGTTTTTGGCATTTGAGGGTGACTACGAAGCTCTTACTGAATTCATTTTTACCAACAAACAGGTGGTGGATAGACCTTATCATTGGGATGGGAGCAGCCCTAGCATTCCCTCTGATATGCTACTTATGCTTTGCCCTATGGAGAAAATACAAAGCAGAAGAAAAATGAAGCAAAAGAACATATTACATGAAATTGGAGGTAATGCAATGCTTTCCATGGTGTACGGAAAAGCCAAAAAGAGTAAGAAACATGGAAAATCAAGCAATGAGGGAACACTAACTGATGGACAAGAAGTAGCAATAAAGCGACTTTCTAAAAGTTCAGGACAAGGACTTACGGAGTTTAAGAATGAAGCTAAACTCATGGCCAAACTCCAGCACACTAATCTAGTGAGGCTTTTAGGATTCTGCATTCAAAGAGATGAAAGAATATTAGTCTATGAGTACATGTCCAACAAGAGCTTAGACTTCTATCTATTTGAGATTCTTAGTGGAAAGAAGAATAATAGTCGCTATAATTTACAACATCCACTAAATCTCATAAGATATGCGTGGCAGCTTTGGAATGAAGTTATTTATCTGGTCTCCAAAGAAAAACAAGCTCAGGAATCAGAACCAGTGGGCCATGAACCTTGGAGACAAAGTGAAAGATATTCATGGGGCAAAATGAAACAAATCATTTTTCTATTCCTGGTAATTCTTGATTGGTTACCGTCTTGCAATAAGTTGACCAGCGGGTGCCGTCCAAGGAGACAATATGTGTGGATTGCCAACCTAGTAATTGACGAAAGAGGTAGCTTGAAAATTTTATATAATGGTGGTTTCAACTCTATAGTACTGTATTCCAGCCAAGTAGCTCAAAATATTTCTGCTCTTTCTGAGCTTGGGGACGACGGCAACTTGAGACTAAATCAAATGGATACAACAAGTGAATATCCCGTAGAAAAGGAACTGGCACAAAGTTTGGACTGCCCCAACAACATCTTTCTTCCAGGAATGAGAGGGGGAATTAACAACGGAACAGGATGCAAATGGACCATAACATCAATGAAAGGCCTAAACACTCCTGCGCTGAGTTGCTTCACTTTTGGGATGGACCCCAATAATACAAGGCAATTACTCATGCAGTGGCAAGGAAACATATACGGGACCAGCGGGGCTGAAACAGAAGAGGAGATTACTACCGTAGCAATTATGGCTCTGTTCTCATATCATCAACATTCTTCTGAAATGATCTTCAGTTTCGTCCTTTTTCTTGTTTTCAGAGGAGCTAACTATACAGTCACATTTTGTCCTGCTTCTTTTTCAAGGTCTACAGGAGATTCTGGGGAACAAGGGCAACACAAACACAAAGGTGACTGCGAAGCTCTTACTGGATTCATTTTTACCAATAAACAGGTGGTGGATATGGCTTATCGTTGGGATGGGAGCACCCCTAGCATTGATTCTGATCTGCTACTTATGCTTTGCCTTGTGGAGAAAATACAAAGCAGAAGGTAA 2520 0.4258 MEHTIVDALLLREVVGKKRSEVGELRSEEVKLFHQTKEKERMAEFADFKVQGEKTMDANGPFSEDKCKERAYRKSAKSEDTAHCLVNAESRRWLWFIVVGGVVTETVREDGLLFRPISQVQKTSRQGNRKDSKIPSWKPRHSALKTLVLQQTTTRLQINWKSKALSKFLSDSCMKLVKLKPSSGCSVLDSYTGVSGATFTLVNKCDYPVWPGILAQEGSCATTGCVADLNSQCPPELRADGGNGCKSACGAFGKPEYCCNGSYSSSSACKPSNYSEMFKSACPRAYSYAFDDPTSTFTCSGANYTVTFCAATLPGFTGDSGEQGRHKHKGGLLGKVDYQHKFLAFEGDYEALTEFIFTNKQVVDRPYHWDGSSPSIPSDMLLMLCPMEKIQSRRKMKQKNILHEIGGNAMLSMVYGKAKKSKKHGKSSNEGTLTDGQEVAIKRLSKSSGQGLTEFKNEAKLMAKLQHTNLVRLLGFCIQRDERILVYEYMSNKSLDFYLFEILSGKKNNSRYNLQHPLNLIRYAWQLWNEVIYLVSKEKQAQESEPVGHEPWRQSERYSWGKMKQIIFLFLVILDWLPSCNKLTSGCRPRRQYVWIANLVIDERGSLKILYNGGFNSIVLYSSQVAQNISALSELGDDGNLRLNQMDTTSEYPVEKELAQSLDCPNNIFLPGMRGGINNGTGCKWTITSMKGLNTPALSCFTFGMDPNNTRQLLMQWQGNIYGTSGAETEEEITTVAIMALFSYHQHSSEMIFSFVLFLVFRGANYTVTFCPASFSRSTGDSGEQGQHKHKGDCEALTGFIFTNKQVVDMAYRWDGSTPSIDSDLLLMLCLVEKIQSRR 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0244 839 SMART tha2 199 310 IPR001938 -
Glsi06g0244 839 Pfam Protein tyrosine and serine/threonine kinase 434 537 IPR001245 GO:0004672|GO:0006468
Glsi06g0244 839 SUPERFAMILY Osmotin, thaumatin-like protein 197 309 IPR037176 -
Glsi06g0244 839 FunFam Putative DUF26-domain receptor-like protein kinase family protein 412 489 - -
Glsi06g0244 839 SMART tyrkin_6 399 615 IPR020635 GO:0004713|GO:0006468
Glsi06g0244 839 PANTHER OS03G0233200 PROTEIN 219 309 IPR001938 -
Glsi06g0244 839 Gene3D Thaumatin 215 309 IPR037176 -
Glsi06g0244 839 ProSiteProfiles Thaumatin family profile. 218 309 IPR001938 -
Glsi06g0244 839 Pfam Thaumatin family 219 309 IPR001938 -
Glsi06g0244 839 Gene3D Phosphorylase Kinase; domain 1 390 489 - -
Glsi06g0244 839 Pfam D-mannose binding lectin 598 691 IPR001480 -
Glsi06g0244 839 SUPERFAMILY Protein kinase-like (PK-like) 433 536 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0244 Glsi-ChrGlsi06 1633346 1648247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0244 188 506 Receptor kinase-like Gene Family AT5G38280 32.523 2.35e-39 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi06g0244 PK_Tyr_Ser-Thr 6.8e-13 CL0016