Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0226 ATGGGTGTGAACTCCTATAGAGTTGATCACTTCGATTGCCATGCAACCACCATTCTCAAAATCCAAGCCGAAGTACCAATGCCATCGTTGGAAATTCACAGGGTTAGCCTCCCACCCGAGCAAACCACGGTCCAGAAACTGAAGCACAGGCTCTCTGAGATCTTCTTCCCAGATGACCCACTTTACAGATTCAAGAATCAAACTTGGTTCATGAAGCTTATTCTGGGTCTTCAATATCTCTTCCCCATTTGCCAGTGGGGACCTGAGTACAACCTCAAGCTTCTCCGTTCTGATACCATCTCTGGCCTCACCATTGCTAGTCTGGCTATTCCACAGGGAATAAGTTATGCAAAGCTTGCAAATTTGCCACCTATAGTTGGACTATATTCCAGTTTTGTGCCCCCGTTGATTTATTCCCTGCTTGGGAGTTCTAGGCATCTTGGTGTTGGCCCTGTTTCAATTGCTTCTCTGGTTATGGGGTCAATGTTAAGCGAGACAGTTTCTTATACTGCTGATCCAATTCTCTATCTGAAACTGGCTTTCACTGCCACCTTCTTCGCTGGTTTATTCCAATCTTCTCTGGGTATTTTAAGGTTAGGGTTTGTAATTGATTTTCTATCAAAGGCAACGCTGGTGGGTTTCATGGCGGGTGCAGCGATCATTGTGTCACTACAGCAGCTGAAAGGATTACTTGGAATAGTGCACTTCACTAGCAAGATGCAGATGATCCCTGTTTTGACCTCTGTTTTGGAGCATAGAGACGAGTGGTCATGGCAAACTATTGTAGTGGGATTCGGCTTCCTGGCCTTTCTTCTGACAACTAGGCATATTAGCTTGAAGAAACCAAAACTATTCTGGGTTTCAGCAGCTGCCCCATTGGCATCAGTTATTCTGTCTACTATTTTAGTCTTTCTTCTCAGAAACAAAGCTCATGGAATTGCAATTATCGGACACTTACCAAAGGGCCTTAATCCGCCATCATCAAATATGCTATACTTCAATGGCCCTTATTTGGCACTTGCTATCAAAACTGGAATTGTTACTGGGATCTTATCTCTTACTGAAGGAATTGCGGTAGGAAGAACATTTGCTGCACTTAAGAACTACCAAGTGGATGGAAACAAAGAAATGATGGCCATTGGTCTTATGAACATAGCCGGTTGTTGTTCTTCATGCTATGTCACAACAGGATCATTTTCTCGATCGGCTGTTAACTACAACGCTGGAGCACAGACAACAGTTTCAAATATAATAATGGCTTCAGCTGTTCTTGTAACCCTTCTCTTTCTCATGCCTCTCTTCTATTACACACCAAATGTTGTCTTAGCAGCCATCATCATCACTGCTGTGATTGGACTGATAGATTATCAAGCTGCATATAAATTGTGGAAGGTTGACAAGCTCGATTTCTTGGCTTGTTTGTGCTCCTTTTTTGGTGTTCTCTTCATCTCGGTGCCTCTAGGACTTGGTATAGCGGTGGCAATTTCGGTCTTCAAGATTCTGCTTCATGTATCTAGGCCAAACACTGTGGTTTTGGGGAACATACCAGGAACACAAATATTTCACAACCTAAACCAATATAGAGAAGCTTTAAGGGTTCCTTCATTTCTCATTTTGGCTGTTGAGTCTCCCATCTACTTTGCTAATTCAACTTACTTGCAAGAAAGGATACTGAGATGGGTTCGAGAAGAGGAAGAGCGTATAAAAGCAAACAATGAAAGTACATTGAAGTGCATAATTCTAGACATGACAGCCGTGACAGCCATAGACACAAGTGGGATTGACGCTTTACGTGAACTTAGAAAGATTCTGGAGAAAAGATTATTGCAGCTTGTTTTGACAAATCCTGTTGGAAATGTTATGGAAAAGTTGCATCATTCAAATATATTAGATTCCTTTGCGATGAAAGGACTCTATCTCACAGTGGGAGAAGCTGTGGCTGACATTTCTTTGTCCTGGAAAGCTCAGCCTTCACATTTATAA 1983 0.4236 MGVNSYRVDHFDCHATTILKIQAEVPMPSLEIHRVSLPPEQTTVQKLKHRLSEIFFPDDPLYRFKNQTWFMKLILGLQYLFPICQWGPEYNLKLLRSDTISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLIYSLLGSSRHLGVGPVSIASLVMGSMLSETVSYTADPILYLKLAFTATFFAGLFQSSLGILRLGFVIDFLSKATLVGFMAGAAIIVSLQQLKGLLGIVHFTSKMQMIPVLTSVLEHRDEWSWQTIVVGFGFLAFLLTTRHISLKKPKLFWVSAAAPLASVILSTILVFLLRNKAHGIAIIGHLPKGLNPPSSNMLYFNGPYLALAIKTGIVTGILSLTEGIAVGRTFAALKNYQVDGNKEMMAIGLMNIAGCCSSCYVTTGSFSRSAVNYNAGAQTTVSNIIMASAVLVTLLFLMPLFYYTPNVVLAAIIITAVIGLIDYQAAYKLWKVDKLDFLACLCSFFGVLFISVPLGLGIAVAISVFKILLHVSRPNTVVLGNIPGTQIFHNLNQYREALRVPSFLILAVESPIYFANSTYLQERILRWVREEEERIKANNESTLKCIILDMTAVTAIDTSGIDALRELRKILEKRLLQLVLTNPVGNVMEKLHHSNILDSFAMKGLYLTVGEAVADISLSWKAQPSHL 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0226 660 CDD STAS_SulP_like_sulfate_transporter 527 631 - -
Glsi06g0226 660 FunFam Sulfate transporter 31 506 652 - -
Glsi06g0226 660 Pfam STAS domain 527 645 IPR002645 -
Glsi06g0226 660 Pfam Sulfate permease family 95 474 IPR011547 GO:0016020
Glsi06g0226 660 ProSiteProfiles STAS domain profile. 526 649 IPR002645 -
Glsi06g0226 660 SUPERFAMILY SpoIIaa-like 531 647 IPR036513 -
Glsi06g0226 660 Gene3D STAS domain 506 650 IPR036513 -
Glsi06g0226 660 NCBIfam sulfate permease 82 645 IPR001902 GO:0016020|GO:0055085
Glsi06g0226 660 PANTHER SULFATE TRANSPORTER 45 649 IPR001902 GO:0016020|GO:0055085
Glsi06g0226 660 ProSitePatterns SLC26A transporters signature. 124 145 IPR018045 GO:0008271|GO:0008272
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0226 Glsi-ChrGlsi06 1538775 1543049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0226 30 657 Inorganic Solute Cotransporters AT3G15990 78.889 0.0 1039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g0226 06 1538775 1543049 Glsi06g0226 06 1538775 1543049 ECH