Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0208 ATGCGGGGTCCAAATAAAGCTGCTAAGTCACGTGCTAATTGTAATAAACTGCCCCTTTTGCCTTTGGAGCTACCTCATCTCCATTTCCCCGAGTTTCAAAATTTCAAAAGATTTCAAAGTTTTCTTTGCCTTGCCTTTATTGGCAACAGCATCCCTCTCCCTCCCTCCCTCCACTCAACCTTGTTGTCAGGTGCAGTCAACAAGTCAAAGAGGCAAATTGTAATACCCGAGACAACTCGAGGGTATACAGGTCGGGGAGCTTGCCAGATAGACCCAGGATTTATGCATCAAGATTTAGAGTCTATATATCTAAATCTTGCAGACATGAAGAAAGAAAACACTGTCACATTGAAAGCTGGAGAGCTACCTGGTCGATTAACTCGTGCTCGAGCTGCTGCCTTTCGTGCACCCAGACAGCTCCCCCCTCTGAAGGAACCAACTCAACAAAATCAGAAACAATTACGAGCTAATCCAAAAAGAGCAGCTTCTGATAAAGCATGTCTTCAGCGTAAAAAGAGGGTTGTTCTTCAGGATGTTACCAATGTCACCAGTGTTTGCTGTGGAAATTCATATAGGAACTGTTTCAATGCAACTAAAATTCAGGCTACAAAATGCAAGCGGGCTAAGATTGGTCAAATTAGTAGTTCCAAAGTGGTTCCTTCAGTTTCTGTGGAGCTACCACTGCCTCAAGTTGACTCAAAAGCAAAGAATTTACCTGAAACAGAAGAAGCTACTTGTTCAGTTAATTCAAAAGACAACTCCCTTCATCAGCCAAGTGCCACCAACGTATGTGGCACATATGATAGTCTGTTTGGAGCCAACAGAGGTAGCCTTTCTGAATTTCCAAGCTCATCAAAGAATCCAGATATCTCTGATATAGATGCTGATCATGAAGATCCTCAATTATGCAGCCTCTATGCTGCTGATATCTATGACAACTTACGTGTTGGTGAGCTTGCAAGAAGACCTTATCCTAACTTTATGGAAATAGTACAGCGAGATATCACTCAAAGCATGCGTGGGATACTAGTTGATTGGCTTGTAGAGGTTTCTGAGGAATACAAATTGGTTCCAGATACTCTTTACCTCACTGTATATCTAATAGATTGGTTTCTCTCCAAAAATTACATAGAAAGACAAAGACTTCAGCTGCTAGGCATCACTTGCATGCTAATTGCCTCGAAGTACGAAGAAATTTGTCCTCCACGAATTGAAGAATTCTGTTTCATCACAGATAATACCTACACAAAAGATGAGGTACTTAAAATGGAGACTCAAGTGTTGAAGTGCTCCGAATTTCAACTGTTTGCCCCCACTACAAAAACTTTCCTCAGGAGGTTTCTTCGAGCAGCACAGGCTTCTTACAAGAGCCCTAGCCTTGAATTGGAGTACCTATCCAATTACCTAGCTGAATTAACCCTGATGGACTATGGTTTCTTGAGTTTCCTTCCATCAATCGTTGCTGCATCAGCTGTATTTCTTGCCAGATGGACATTAGATCAGTCATACCACCCATGGAATCCAACTCTTCAACACTATGCCAGTTACAAAGCATCAGATCTGAAAACTACAGTTCTCGCATTACAAGATCTACAGCTGAACAATAATAACTGCCCTTTAAGTGCCATTCGCATGAAGTACAGGCAAGACAAGTTTAGAAGTGTGGCGGCCTTGTCTTCACCAAAACTGCTTGAAACACTGTTCTGA 1707 0.42 MRGPNKAAKSRANCNKLPLLPLELPHLHFPEFQNFKRFQSFLCLAFIGNSIPLPPSLHSTLLSGAVNKSKRQIVIPETTRGYTGRGACQIDPGFMHQDLESIYLNLADMKKENTVTLKAGELPGRLTRARAAAFRAPRQLPPLKEPTQQNQKQLRANPKRAASDKACLQRKKRVVLQDVTNVTSVCCGNSYRNCFNATKIQATKCKRAKIGQISSSKVVPSVSVELPLPQVDSKAKNLPETEEATCSVNSKDNSLHQPSATNVCGTYDSLFGANRGSLSEFPSSSKNPDISDIDADHEDPQLCSLYAADIYDNLRVGELARRPYPNFMEIVQRDITQSMRGILVDWLVEVSEEYKLVPDTLYLTVYLIDWFLSKNYIERQRLQLLGITCMLIASKYEEICPPRIEEFCFITDNTYTKDEVLKMETQVLKCSEFQLFAPTTKTFLRRFLRAAQASYKSPSLELEYLSNYLAELTLMDYGFLSFLPSIVAASAVFLARWTLDQSYHPWNPTLQHYASYKASDLKTTVLALQDLQLNNNNCPLSAIRMKYRQDKFRSVAALSSPKLLETLF 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0208 568 SUPERFAMILY Cyclin-like 438 563 IPR036915 -
Glsi06g0208 568 PANTHER CYCLINS 264 529 IPR039361 -
Glsi06g0208 568 Gene3D - 309 557 - -
Glsi06g0208 568 FunFam Mitotic cyclin 6 323 423 - -
Glsi06g0208 568 SUPERFAMILY Cyclin-like 298 435 IPR036915 -
Glsi06g0208 568 SMART Cyclin_C_2 438 561 IPR004367 -
Glsi06g0208 568 MobiDBLite consensus disorder prediction 139 164 - -
Glsi06g0208 568 Pfam Cyclin, N-terminal domain 309 434 IPR006671 -
Glsi06g0208 568 CDD CYCLIN_AtCycA_like_rpt1 299 434 - -
Glsi06g0208 568 MobiDBLite consensus disorder prediction 143 157 - -
Glsi06g0208 568 SMART cyclin_7 442 530 IPR013763 -
Glsi06g0208 568 SMART cyclin_7 345 429 IPR013763 -
Glsi06g0208 568 CDD CYCLIN_AtCycA-like_rpt2 438 552 - -
Glsi06g0208 568 FunFam Cyclin A1 425 557 - -
Glsi06g0208 568 Gene3D - 323 436 - -
Glsi06g0208 568 Pfam Cyclin, C-terminal domain 438 560 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0208 Glsi-ChrGlsi06 1407656 1417379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0208 109 568 Core Cell Cycle Gene Families AT1G80370 57.816 5.64e-173 496