Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0193 ATGTTGCGTCAAATCATCCAAACAAGAATAACCAGAGTCAAAATTAAGCAGTGTGAACTGAAACAGAGTGAAGAAGCCTTTGATTTGAGATTCCGTGGGTCTTTCAAAGACTTGGACTTCGGCATTCCATTCCCATTGTTCTGCAAGAAGGAACACTCCCACAAACACCAACTGCTAAAACTTCTAGTCGTATCTGCACCGAACCTTGCGCTATATTCTTGGTCTGAACAACGACTACAACTCTGGGAAAGAGGTAAAAGAGAAAATGAAAAGAAGGAACTTAAGGAAAGTGACAGAGAAAGAGAAATGAAGATCTTAAAAGCACTTTTCAAGGGTGTAGTAAATGATATTCAAGGAAGAGCAAAGTATTACAAGGAAGATTGGATTTCTGGTCTCCGTTCAGGAATTGGGATATTGGCGCCAACTACATATATTTTCTTCGCTTCTGCTCTTCCTGTTATTGCCTTTGGTGAGCAGCTGAGTAGAGACACAGATGGAAGCTTGAGCTCAGTAGAAACATTGGCTTCTACTGCTATCTGCGGAATCATACACTCAATTCTCGGAGGCCAACCTCTGCTAATACTTGGAGTTGCAGAGCCCACTATCATCATGTACACTTATTTGTACAATTTTGCCAAAGATAGGGATGGTTTAGGACGAGAACTCTTTCTGGCTTGGGCTGCATGGGTCTGCCTCTGGACTGCTCTCTTGTTGTTTCTACTAGCAATGCTCAATGCAAGTACCATTGTCAATAGATTTACAAGAGTTGCTGGTGAGCTTTTCGGCATGTTAATCACAGTCTTGTTCATTCAAGAGGCTATCAGGGGGGTGGTGAGTGAGTTTAAGGTTCCTAAAGAGGAGGACCCAACATTAGAGAAGTACAAATTCCAGTGGCTTTATACAAATGGACTACTGGCTATTATATTCACCTTAGGCCTTCTCTTCACTGCTCTGAAGGTAAGAAAAGCAAGATCATGGTTATTCGGCACAGGTTGGTTCAGAAGTTTCTTAGCAGATTATGGGGTACCTTTAATGGTGGTGATGTGGACGGCTCTGTCATTCGCAGTACCAAGTAAAATTCCCTCTGGAGTTCCCAGGAGGCTCTTTGCGCCTCTTGCATGGGAATCAACCTCTTTGCACCATTGGACAGTGATCAAAGACATGGTGAAGGTCCCTTCTGCATATATTTTTATTGCATTAATTCCAGCCTCGATGATAGCGGGGCTTTACTTCTTCGACCATAGTGTTGCTTCCCAATTAGCACAACAGAAGGAATTCAACCTTAAGAAATCTTCTGCCTATCATTATGACGTATTGTTGCTGGGATTCATGACTTTGCTTTGTGGATTAATGGGTTTGCCACCTTCGAATGGAGTTCTGCCTCAATCCCCCATGCACGCCAAGAGCCTTGCTGTTCTCAAGAGGCAGTTGATTCGGAAGAAGATGATGGAAAGTGCCAAGGAAAGCATAAGGCAGAAAGCTAGCAACTCTGAAATCTATGGAAACATGCAAGCAGTGTTTATAAAAATGGACAGAAGCCCAGCTACTTCTTCAGTGGTAAAAGAACTCGAGGATCTGAAAGACGCTGTCCTAAAAGAAGAAGAAAAGAGTACATTTGACCCTGAGAAACACATTGATGCACATCTTCCTGTGAGAGTAAACGAGCAGAGAGTGAGCAATCTCTTACAAGCACTCCTTGTTGGAGCTTCAGTCTTCGCTATGCCTCTCATAAAAAAGATACCTACTTCAGTTCTGTGGGGGTACTTTGCCTACATGGCCATTGACAGTCTTCCAGGAAACCAATTCTGGGAAAGGATACTAATTGTCTTCGTAGCACCTAATAGGCGGTACAAGTTGTTGGAAGGGGATCATGCTTCATTTGTTGAGTCAGTGCCTTTCAGAGCCATAGTGTTCTTCACACTCTTCCAATGTGTGTATTTGTTGGTTTGTTTTGGAGTGACATGGATTCCCATAGCTGGAATCTTGTTCCCCTTGCCCTTCTTTGTGCTGATCACAATAAGGCAGTATATCCTACCCAAGCTGTTCAATCCTCACCATTTAAGGGAACTGGATGCAGCTGAGTATGAAGAAATTGCTGGTGCTCCAAGGCTTTCCTTGAATCTCTCTTTCAGGGAGGTGGAATCACCTGGCGTTGGATCAAGGGAAATGGGTGATGCTGAGATATTAGATGAGTTGACAACTAGTAGAGGGGAGTTGAAGCTCAGAACTGTTAGCTTTAATGAGGAAAGACATGTCTATCCAGAGGAAATAGTGAGAGAAAGGAATTCGGAGGGTTGA 2298 0.4326 MLRQIIQTRITRVKIKQCELKQSEEAFDLRFRGSFKDLDFGIPFPLFCKKEHSHKHQLLKLLVVSAPNLALYSWSEQRLQLWERGKRENEKKELKESDREREMKILKALFKGVVNDIQGRAKYYKEDWISGLRSGIGILAPTTYIFFASALPVIAFGEQLSRDTDGSLSSVETLASTAICGIIHSILGGQPLLILGVAEPTIIMYTYLYNFAKDRDGLGRELFLAWAAWVCLWTALLLFLLAMLNASTIVNRFTRVAGELFGMLITVLFIQEAIRGVVSEFKVPKEEDPTLEKYKFQWLYTNGLLAIIFTLGLLFTALKVRKARSWLFGTGWFRSFLADYGVPLMVVMWTALSFAVPSKIPSGVPRRLFAPLAWESTSLHHWTVIKDMVKVPSAYIFIALIPASMIAGLYFFDHSVASQLAQQKEFNLKKSSAYHYDVLLLGFMTLLCGLMGLPPSNGVLPQSPMHAKSLAVLKRQLIRKKMMESAKESIRQKASNSEIYGNMQAVFIKMDRSPATSSVVKELEDLKDAVLKEEEKSTFDPEKHIDAHLPVRVNEQRVSNLLQALLVGASVFAMPLIKKIPTSVLWGYFAYMAIDSLPGNQFWERILIVFVAPNRRYKLLEGDHASFVESVPFRAIVFFTLFQCVYLLVCFGVTWIPIAGILFPLPFFVLITIRQYILPKLFNPHHLRELDAAEYEEIAGAPRLSLNLSFREVESPGVGSREMGDAEILDELTTSRGELKLRTVSFNEERHVYPEEIVRERNSEG 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0193 765 PANTHER ANION EXCHANGE PROTEIN 76 699 IPR003020 GO:0005452|GO:0006820|GO:0016020
Glsi06g0193 765 Gene3D Helical hairpin bin 120 162 - -
Glsi06g0193 765 Pfam HCO3- transporter family 109 282 IPR011531 GO:0006820|GO:0016020
Glsi06g0193 765 Pfam HCO3- transporter family 299 476 IPR011531 GO:0006820|GO:0016020
Glsi06g0193 765 Pfam HCO3- transporter family 551 641 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0193 Glsi-ChrGlsi06 1297408 1301599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0193 100 764 Antiporters AT1G74810 68.538 0.0 970
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1560 08 11234535 11238286 Glsi06g0193 06 1297408 1301599 ECH
Glsi06g0193 06 1297408 1301599 Glsi06g0193 06 1297408 1301599 ECH