Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0169 ATGAAGGAGAAGATGAAGAAGTCCTTGGGTTTACAGGGTATCCAGATATGCTCACATCGATACTATGAAATGAGAAGATGATTGAAACGATACGAGGGCTTCAAGGAAGGAAAGCAAAGAATTCTTGTGGCAACAGATTTAGTAGAAAGGGGAATTGACATAGAACGTGTTGGAAGAGCTGGTAGATTTGGCACCAAGGGTCTTGCAATCACCTTCGTGTGTTCTTCATCTGATTCTGATGTTCTTAATCAGGCGATATTTTCACTTAAACTAGGATACATCTGTCTGAGAATTGGTATAAGCAGCTTTACAAAAGCAGAAGCGCAGAAGTCTGCTGATGGAGTTACTCTCTTAACCCGCAGGGCTGCTAATGGCATTTGA 381 0.4173 MKEKMKKSLGLQGIQICSHRYYEMRRXLKRYEGFKEGKQRILVATDLVERGIDIERVGRAGRFGTKGLAITFVCSSSDSDVLNQAIFSLKLGYICLRIGISSFTKAEAQKSADGVTLLTRRAANGI 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0169 126 Gene3D - 2 56 IPR027417 -
Glsi06g0169 126 Gene3D - 57 92 IPR027417 -
Glsi06g0169 126 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 80 IPR027417 -
Glsi06g0169 126 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 16 82 - -
Glsi06g0169 126 Pfam Helicase conserved C-terminal domain 11 58 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0169 Glsi-ChrGlsi06 1166284 1168548 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0169 16 84 Eukaryotic Initiation Factors Gene Family AT5G11200 57.955 7.07e-24 93.2