Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0125 ATGGAAGAAGGCGCTGGAGACCGCATATGACCCAGTGATCTAGGTTTGTTCTGCGAATCCATTGAATTTTTTGAAGAAACGTATTTCTTTCTCTTTCGATTTCCCAAGTTTTCGATCTCGGCAAGTTGCATTTCTTTTTATCCCTTCGATGATCTACAGAATCATTCCAACATTGTTTTGAATTTTCTTTGCTGCCAAATCATGTCTCATAAAACCGATAACAATTATTCTCCAATACCCAAAAGCTCATATGTAGAATTACAGCCTCAAAATGAATTCGAAAACCCTAGAATCTCCTTAGAAAGGCCGTCTTTTGATGAAGAAGTCTATTTGAGATCCAAAGAAGTTGATGCTGATGATGATTTTGAATTTGACATTGATAATTATCCGCTTGTTGTTGTTGGGACTAATAATGGTTCCGGGGTACCAGGGGCTGTGTTCAATCTGACCACGACGATTATTGGGGCAGGGATTATGGCCCTCCCCGCCACAATGAAAATTCTTGGAGTGGTTTTGGGGATTGTGTTAATAATTTCGATGGGGATTCTGTCAGAAATTAGTGTCGAATTGTTAGTGCGCTTTTCAGTTTTTTGTAAAGCATCGTCTTATGGAGAGGTTGTTCAACATGCCATGGGAAAACCGGCGAGGATTTTGTCTGAAATCTGTATTATAGTGAACAATGCTGGTGTTTTGGTGGTTTATTTGATAATCATGGGGGATGTTATGTCTGGTTCCGTTCGTCATTTGGGGGTTTTCGATCAATTAATGGGGAGTGGAGTGTGGGACCAGAGGAAGCTTGTGATATTGGTTGTCATGGTGATTTTTCTTGCACCACTTTGTTCTTTGGACAAGATTGATTCGTTGAGCTTGACTTCAGCTGCTTCTGTGGCTCTTGCTGTTGTGTATGTTGTGGTGGCTTTCGTTGTAGCTTTTATTAAGCTTGTTGAGGGCCGGATTGATTCTCCAAGGATGAGTCCTGATTTTAGCTCAAAAACGGCCATATTAGATTTGCTTGTGGTGATTCCAATCATGACAAATGCATACATTTGCCATTTTAATTTACAGCCAATATACAACGAACTCAAAGGACGGTCTCCTCAGAAGATGAACCGGGTAGGAAGGATCACCACTATATTATGCATCCTGGTATATGCATCAACAGCTCTATCAGGTTATCTACTATTTGGGAAGGATACAGAGTCTGATGTGCTGACTAATTTTGATAAGGATCTAGGAATTCGTTTTAGCTCAGCCCTGAACTATATCGTCCGGGTTGGTTACATTCTCCACTTGATACTTGTTTTTCCTGTTATCCATTTCTCCCTGCGCCAAACGGTGGATTCCTTGGTGTTTGAGGGATTGCCTCCCCTTTCAGAGAGTAGGAAGAGATCTCTGGGGTTGACAATGGTGCTGTTGTTCCTCATATATATTGGATCTACCATGATTCCAAACATTTGGACAGCCTTTAAGTTCACTGGGGCTACTACAGCAGTTTCACTTGGATTTATTTTTCCATCTCTAGTCGCCTTAAGGTTAAGTCATCAAGGCGGTTTGAGCCATTTAGAATGGTTTCTGTCATGGTTTATGTTGGTACTGGCAGTGATCGTTAGCATAGCTGGAGTCATTGGCAATGTGTATAGCATCAAGAGTAAATCTCAGTGA 1662 0.4116 MEEGAGDRIXPSDLGLFCESIEFFEETYFFLFRFPKFSISASCISFYPFDDLQNHSNIVLNFLCCQIMSHKTDNNYSPIPKSSYVELQPQNEFENPRISLERPSFDEEVYLRSKEVDADDDFEFDIDNYPLVVVGTNNGSGVPGAVFNLTTTIIGAGIMALPATMKILGVVLGIVLIISMGILSEISVELLVRFSVFCKASSYGEVVQHAMGKPARILSEICIIVNNAGVLVVYLIIMGDVMSGSVRHLGVFDQLMGSGVWDQRKLVILVVMVIFLAPLCSLDKIDSLSLTSAASVALAVVYVVVAFVVAFIKLVEGRIDSPRMSPDFSSKTAILDLLVVIPIMTNAYICHFNLQPIYNELKGRSPQKMNRVGRITTILCILVYASTALSGYLLFGKDTESDVLTNFDKDLGIRFSSALNYIVRVGYILHLILVFPVIHFSLRQTVDSLVFEGLPPLSESRKRSLGLTMVLLFLIYIGSTMIPNIWTAFKFTGATTAVSLGFIFPSLVALRLSHQGGLSHLEWFLSWFMLVLAVIVSIAGVIGNVYSIKSKSQ 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0125 553 Pfam Transmembrane amino acid transporter protein 140 543 IPR013057 -
Glsi06g0125 553 PANTHER AMINO ACID TRANSPORTER 139 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0125 Glsi-ChrGlsi06 890930 894299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0125 73 553 Amino Acid or Auxin Permease AAAP Family AT1G80510 72.912 0.0 665