Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0123 ATGCCCAAGTCAGTTCTTAAAGCTGGAAGCAGGCCACCATGGGTAGGTCTTGCAGCTGCAGTCTGGGTCCAAATAGCTGCTGGCAACTCCTACAACTTCCCACTCTACTCATCTGCACTCAAATCCGTAATGGGCCTCAACCAGCAACAGGTGACCATACTGGGAGTGGCCAATGATATTGGGGAGAACGTAAGTTTGCTTCCTGGTATTGCCTGCAATAAGTTCCCTCCTTGGGCTCTGCTTCTAATTGGTACCGTGCTTTGTTTCCTGGGTTATGGAGTTATCTGGCTCGCTGTTAGCCAAACCGTTTCGAGCTTACCATATGTGCTGTTATGGCTTGCACTTTGTATTGCCACTAATGGAGGTGCATGGTTTGGCACAGCTGTGCTTGTTACCAACATGAGGAACTTCCCGCTCAGTAGGGGATCCGTTTCTGGCATTCTTAAAGGTTATGTGGGGATTAGTGCTGCAGTTTATACGTTAATCTATAGCATGGTGCTAAAAGGTTCTTCTTCAAGACTATTGTTGTTCCTTGCAATTGGAATTCCTGTTGTTTGTTTAGCTATGATGTACTTCATTCGGCCTTGTACTCCTTCTGGGGAAGATTCCTCAGTTCATGTCCACTTTATTATCGTACAAGTTGCAAGTGTTATACTTGCCACCTATCTTGTCTTCACCACAGTAGCCTATGAGATGGTTTCCATAAGTGATACTGTTTCCTACATCTTAGTTGCCATCATGATAATACTTTTAATGACTCCGCTTGCAATTCCTGTTAAAATGACACTATTCCCTGGCAATCCAAAGAAAAAAGGACCACAGGATGGTTCTTCAGATCAGCTGGGATCGGGTGATGATCTGGCCCATATAGATCCGTTATTGACACCGTCTTCCTCAGCTGCATGTCTTGGAAGTTTTCGTGAAAGTGAGGATGCTTCAGATGTTGAGATACTTCTTGCAGAGGGGGAGGGAGCAGTGAGGAAGAAAAGAAGACGACCTAAAAGGGGAGAAGATTTCAAGTTTCGTGAAGCTTTAGTCAAGGCTGATTTCTGGCTTCTTTGGTTTGTTTATTTTCTAGGGGTTGGTTCAGGAGTAACAGTTCTCAATAATTTAGCTCAAATTGGAATTGCTTTGGGTGTTGATAATACAACCATATTGCTCTCAGTTTTTAGCTTGTGCAATTTTATTGGTCGTCTTGGTGCTGGAGTTGTTTCTGAACACTTTGTCAGGTCCATGACACTACCTCGAACATTTTGGATTACTTGTACACAAATAATTATGATCATAGTATTTGTCCTTTATGCTTTTGCTCTTAATGGCGGCACTCTCTATACTGCAACGGCTTTGCTTGGAATCTGTTATGGGGTTCAATTTTCTATAATGATCCCAACTGTCTCTGAGCTTTTTGGTTTAAAAAACTTCGGTGTTATTAGTAGCTTCATGTCACTAGGCAATCCAATTGGTGCCCTTCTTTTCTCTGCTCTGCTTGCTGGTTATGTGTATGATGCAGAAGCTGCAAAGCAAGGAGGATCCACCTGCTATGGTGCAAATTGTTTCAAGCTCACCTTTCTGGTTTTGGCTGGCGTCTGCGGATGCAGTACCATCTTGAGTATAATTTTGACAGTTAGAATACGGCCAGTTTACCAAATGCTGTATGCTGGGGGCTCATTTCGTCTTCCTCAGACGTCAAATGGCTGA 1698 0.4346 MPKSVLKAGSRPPWVGLAAAVWVQIAAGNSYNFPLYSSALKSVMGLNQQQVTILGVANDIGENVSLLPGIACNKFPPWALLLIGTVLCFLGYGVIWLAVSQTVSSLPYVLLWLALCIATNGGAWFGTAVLVTNMRNFPLSRGSVSGILKGYVGISAAVYTLIYSMVLKGSSSRLLLFLAIGIPVVCLAMMYFIRPCTPSGEDSSVHVHFIIVQVASVILATYLVFTTVAYEMVSISDTVSYILVAIMIILLMTPLAIPVKMTLFPGNPKKKGPQDGSSDQLGSGDDLAHIDPLLTPSSSAACLGSFRESEDASDVEILLAEGEGAVRKKRRRPKRGEDFKFREALVKADFWLLWFVYFLGVGSGVTVLNNLAQIGIALGVDNTTILLSVFSLCNFIGRLGAGVVSEHFVRSMTLPRTFWITCTQIIMIIVFVLYAFALNGGTLYTATALLGICYGVQFSIMIPTVSELFGLKNFGVISSFMSLGNPIGALLFSALLAGYVYDAEAAKQGGSTCYGANCFKLTFLVLAGVCGCSTILSIILTVRIRPVYQMLYAGGSFRLPQTSNG 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0123 565 CDD MFS_Mch1p_like 12 534 - -
Glsi06g0123 565 Pfam Nodulin-like 13 259 IPR010658 -
Glsi06g0123 565 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 549 - -
Glsi06g0123 565 SUPERFAMILY MFS general substrate transporter 5 198 IPR036259 -
Glsi06g0123 565 SUPERFAMILY MFS general substrate transporter 221 546 IPR036259 -
Glsi06g0123 565 Gene3D MFS general substrate transporter like domains 346 548 IPR036259 -
Glsi06g0123 565 Gene3D MFS general substrate transporter like domains 14 202 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0123 Glsi-ChrGlsi06 881299 884349 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0123 1 565 Nodulin-like Gene Family AT1G80530 62.347 0.0 711