Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0105 ATGGACAATGAGGAAATTCCATCAGTCCCTTCAACGCCTGCAACGCCAGGGACTCCTGGTGCTCCTCTCTTTGGTGGGTTCAGGTCAGAGAGAACTGGTAATGGTTTTGGTGGGAAATCTCTCCTCAAGAATTGCAAATGTTTCAGCGTTGAAGAATGGACCTTAGAAGAAGGAGCCTTGCCTAGAGTGTCTTGCTCATTGCCACCCCCTCCTGTCCCTCTCGCAAGAAAGGTAGGAGCAGAGTTTATAGGCACTCTAATTCTAATGTTTGCCGGGATCGCCACTGCTATTGTGAACCAAAAGATACAAGGCTCCGAGACTCTTATCGGATGTGCTGCCTCTACGGGTCTTGCCGTTATGATCGTCATCCTCTCCACCGGCCACATCTCCGGGGCTCATCTCAACCCTGCTGTCACCATTTCCTTTGCTGCTTTAAAACACTTCCCATGGAAACATGTGCCCATGTATATTGGTGCACAAGTTATAGCGTCTATATGTGCTGCATTTGCATTGAAAGGTTTGTTTCATCCCTTCATGAGTGGAGGAGTCACGGTTCCTTCAGGAGGATATGGCCAAGCTTTTGCTTTAGAGTTCATTATCAGCTTCAACCTCATGTTCGTTGTCACGGCAGTGGCCACCGACACAAGAGCTGTGGGGGAGCTTGCGGGAATCGCGGTGGGAGCGACTGTGATGCTCAACATACTCATAGCCGGGCCAGCAACAGGAGCATCAATGAACCCAGTGAGAACACTAGGTCCAGCTATTGCTGCAAATAACTACAAAGCCATATGGGTCTACCTCATAGCTCCTATACTCGGAGCTCTGGGTGGGGCAGGTACCTACACTGCAGTCAAGCTGCCTGAAGAAGATGGTGACAACCAGGGAAAGGTTTCAACGCCCAGGAGCTTCAGAAGGTGA 918 0.5011 MDNEEIPSVPSTPATPGTPGAPLFGGFRSERTGNGFGGKSLLKNCKCFSVEEWTLEEGALPRVSCSLPPPPVPLARKVGAEFIGTLILMFAGIATAIVNQKIQGSETLIGCAASTGLAVMIVILSTGHISGAHLNPAVTISFAALKHFPWKHVPMYIGAQVIASICAAFALKGLFHPFMSGGVTVPSGGYGQAFALEFIISFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPATGASMNPVRTLGPAIAANNYKAIWVYLIAPILGALGGAGTYTAVKLPEEDGDNQGKVSTPRSFRR 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0105 305 MobiDBLite consensus disorder prediction 1 26 - -
Glsi06g0105 305 Pfam Major intrinsic protein 74 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi06g0105 305 SUPERFAMILY Aquaporin-like 73 290 IPR023271 -
Glsi06g0105 305 CDD MIP 76 281 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi06g0105 305 PANTHER AQUAPORIN NIP2-1 44 289 IPR034294 -
Glsi06g0105 305 Gene3D Glycerol uptake facilitator protein. 71 296 IPR023271 -
Glsi06g0105 305 FunFam Aquaporin NIP2-1 64 296 - -
Glsi06g0105 305 PRINTS Major intrinsic protein family signature 264 284 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi06g0105 305 PRINTS Major intrinsic protein family signature 196 214 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi06g0105 305 PRINTS Major intrinsic protein family signature 152 171 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi06g0105 305 PRINTS Major intrinsic protein family signature 115 139 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi06g0105 305 PRINTS Major intrinsic protein family signature 227 249 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi06g0105 305 PRINTS Major intrinsic protein family signature 76 95 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi06g0105 305 ProSitePatterns MIP family signature. 133 141 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0105 Glsi-ChrGlsi06 763638 766337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0105 1 305 Major Intrinsic Protein MIP AT1G80760 80.259 2.23e-172 478