Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0100 ATGCCTGCTGCTGCTGACACTTCATCAGCATCCGGCCAAACCGTGTGTGTCACAGGCGCCGGTGGCTTCATCGCCTCTTGGATTGTCAAGCTTCTCTTAGAGAATGGCTACACTGTCAGAGGGACCGTGAGAAACCCAGATGATTCTAAGAATGCACACTTGAAAGAGTTAGAAGGAGCAAAGGAGAGGCTAACTCTGCATAAAGTTGATCTTCTTGATCTTGAGTCTGTTAAAGCTGCCATTAATGGTTGCGACGGCGTCTTTCACACGGCCTCCCCGGTCACTGACAACCCGGAAGAGATGGTGGAGCCAGCAGTGAATGGGACCAAGAATGTGATAGTAGCAGCTGTAGAAGCAAAAGTACGCCGAGTGGTATTCACGTCATCAATTGGTGCAGTCTACATGGACCCCAAGAGGAGCGTGGATGTGGTGGTTGATGAGTCTTGCTGGAGTGATTTGGAGTATTGCAAGAGCACAAAGAACTGGTATTGCTATGGGAAGGCAGTGGCAGAGCAAGCAGCATGGGATGTGGCAAGAGAGAAAGGGGTAGACTTGGTGGTTGTGAATCCAGTATTGGTTCTTGGACCATTACTACAACCCACCATCAATGCTAGCACAATTCACATCCTCAAGTATCTCACTGGCTCTGCTAAGACCTATGCAAATGCCACTCAGGCTTACGTGCATGTTAAGGATGTGGCATTAGCCCACATTCTTGTTTATGAGACACCATCTGCTTCCGGTCGCTACTTATGTGCTGAGAGTTCTCTGCACCGTGGAGAGCTCGTTGAAATTCTGGCCAAGTATTTCCCGGAATACCCAAGTCCCACCAAATGTTCAGATGAGAAGAATCCAAGAGCAAAACCATACACATTCTCAAATCAGAAGCTAAAGGATTTGGGCTTGGAATTTACCCCAGTGAAGCAGTGCCTATATGACACCGTCAAGAGCCTGCAGGACAAGGGCATTCTTACTGTTCCCTCAAAGCAGGAAGATTCTATTTAA 1005 0.4806 MPAAADTSSASGQTVCVTGAGGFIASWIVKLLLENGYTVRGTVRNPDDSKNAHLKELEGAKERLTLHKVDLLDLESVKAAINGCDGVFHTASPVTDNPEEMVEPAVNGTKNVIVAAVEAKVRRVVFTSSIGAVYMDPKRSVDVVVDESCWSDLEYCKSTKNWYCYGKAVAEQAAWDVAREKGVDLVVVNPVLVLGPLLQPTINASTIHILKYLTGSAKTYANATQAYVHVKDVALAHILVYETPSASGRYLCAESSLHRGELVEILAKYFPEYPSPTKCSDEKNPRAKPYTFSNQKLKDLGLEFTPVKQCLYDTVKSLQDKGILTVPSKQEDSI 334
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0100 334 CDD FR_SDR_e 15 302 - -
Glsi06g0100 334 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 13 315 - -
Glsi06g0100 334 Pfam NAD dependent epimerase/dehydratase family 15 246 IPR001509 -
Glsi06g0100 334 FunFam Cinnamoyl-CoA reductase 1 6 334 - -
Glsi06g0100 334 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 10 318 IPR036291 -
Glsi06g0100 334 Gene3D - 4 334 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi06g0100 Glsi-ChrGlsi06 728143 731248 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0100 12 278 Monolignol Biosynthesis Gene Families AT1G80820 75.655 3.83e-145 409