Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0096 ATGGACGAACAAAATGAACAAACCCTGCACGAGAACCAGTCCACCGGTCCCCCGAGAAACATTCTCTTCGACAAGTACGAGATGGGTCGACTCTTAGGCCAGGGGAATTTCGCAAAGGTCTATTATGGCAGAAACCTCATCACCAACGAAAGCGTAGCAATCAAGGTAATCAAGAAAGACAAGCTGAAGAAAGACAGGCTGGTGAGGCAAATCAAGCAAGAAGTCTCTGTGATGCGCTTGGTCCGCCACCCACACATCGTTGAGCTGAAGGAAGTTATGGCCACCAAAGGGAAAATCTTTTTGGTCATGGAATACGTTAAAGGTGGGGAATTGTTCTCCAAGGTTGCAAAGGGCAAGCTGAAGGAAGACATGGCTAGAAAATATTTCCAGCAGCTGATCAGCGCCGTCGACTTCTGCCACAGCCGCGGTGTCACCCACCGTGACTTGAAGCCTGAGAATTTGCTCTTGGATGAAAACGAAGATCTCAAAGTTTCGGACTTTGGCTTGTCGGCGTTGCCGGAGCAACGCAGATCCGACGGAATGCTTGTTACACCGTGTGGTACACCGGCTTATGTTGCACCAGAGGTGCTGAAGAAGAAAGGTTACGATGGGTCCAAAGCTGATATTTGGTCCTGTGGGGTAATTCTCTATGCTCTGCTTTGTGGGTATCTGCCATTTCAAGGTGAGAACGTTATGAAGATTTATAGGAAGGCATTCAAAGCTGACTACGAACTTCCTGCTTGGATTTCACCGGGGGCTAAGAACTTGATTTCTAATCTGCTGGTGGCTGACCCAGAAAAGAGATATTCCATCCCAGATATTATGAAGGATCCTTGGTTTCAAATCGGGTTCATGAGGCCAATTGCATTTTCAATAAAGGAGTCAGCTTCCGAAGGTAACAACGATTTCAACGAGGTGGAAAATAACGAACAGGTGGAATTGATCGGGAAGAAGCCTTCCCGGCCGTTTTACAATGCGTTTGAGATCATTTCGTCCTTGTCACACGGGTTTGATCTTAGAAGCTTGTTTGAGACGCGAAAGAGATCTCCATCTATGTTTATATCAAAGTTTTCAGCTTCGGCGGTTTTGACAAAGCTAGAGACGGTGGCGAAGAAGCTGAATTTTAAAATCACAGGGAAGAAGGAGTACAAGGTGAGAATGCAGGGGGAAACAGAGGGAAGAAAGGGGAAGCTGGCGATGACGGTGGAGGTGTTTGAAGTGGCGCCGGAGGTAGCGGTGGTGGAATTCTCCAAGTCTGCCGGAGATACACTAGAGTATATGAAGTTCTGTGAGGACGAGGTGAGGCCTGCCCTGAAAGACATCGTCTGGAGCTGGCAGGGAGACAGTAACTGCCGTCAGTAG 1362 0.4802 MDEQNEQTLHENQSTGPPRNILFDKYEMGRLLGQGNFAKVYYGRNLITNESVAIKVIKKDKLKKDRLVRQIKQEVSVMRLVRHPHIVELKEVMATKGKIFLVMEYVKGGELFSKVAKGKLKEDMARKYFQQLISAVDFCHSRGVTHRDLKPENLLLDENEDLKVSDFGLSALPEQRRSDGMLVTPCGTPAYVAPEVLKKKGYDGSKADIWSCGVILYALLCGYLPFQGENVMKIYRKAFKADYELPAWISPGAKNLISNLLVADPEKRYSIPDIMKDPWFQIGFMRPIAFSIKESASEGNNDFNEVENNEQVELIGKKPSRPFYNAFEIISSLSHGFDLRSLFETRKRSPSMFISKFSASAVLTKLETVAKKLNFKITGKKEYKVRMQGETEGRKGKLAMTVEVFEVAPEVAVVEFSKSAGDTLEYMKFCEDEVRPALKDIVWSWQGDSNCRQ 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0096 453 MobiDBLite consensus disorder prediction 1 20 - -
Glsi06g0096 453 Gene3D Kinase associated domain 1, KA1 319 444 - -
Glsi06g0096 453 Gene3D Transferase(Phosphotransferase) domain 1 106 283 - -
Glsi06g0096 453 FunFam Non-specific serine/threonine protein kinase 319 443 - -
Glsi06g0096 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Glsi06g0096 453 SUPERFAMILY Protein kinase-like (PK-like) 22 281 IPR011009 -
Glsi06g0096 453 ProSiteProfiles NAF domain profile. 319 344 IPR018451 GO:0007165
Glsi06g0096 453 Gene3D Phosphorylase Kinase; domain 1 19 105 - -
Glsi06g0096 453 CDD CIPK_C 325 439 - -
Glsi06g0096 453 FunFam Non-specific serine/threonine protein kinase 19 319 - -
Glsi06g0096 453 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 15 439 - -
Glsi06g0096 453 SMART serkin_6 26 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g0096 453 FunFam Non-specific serine/threonine protein kinase 18 105 - -
Glsi06g0096 453 Pfam NAF domain 323 378 IPR004041 GO:0007165
Glsi06g0096 453 ProSitePatterns Protein kinases ATP-binding region signature. 32 59 IPR017441 GO:0005524
Glsi06g0096 453 Pfam Protein kinase domain 26 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g0096 453 ProSiteProfiles Protein kinase domain profile. 26 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0096 Glsi-ChrGlsi06 715016 716377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0096 19 450 CBL-interacting serine-threonine protein kinases AT5G10930 65.207 0.0 583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Glsi06g0096 Pkinase 8.6e-76 CL0016