Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0094 ATGAAAACGTCTTCTTTCGCTTTAACCGAAGCCAAGTACGTTGCTGGTGACAGCATCAAGCACGTTATGCTTGAAAATGTTCGAGAAGCATCACTTAAGGTTCTGTCTCGACAAGAGAATGTGGCTGGGGTTAAGCTCCCTAAGTTTGAATACACCAGTGATGGCGAGATCACTAAGAGTGACCTTACAGACATCGTTCCTGCACTCGATGAGGCAATCAAGACAACGAATCGGAGAGTGAATGCGCTTGAAAATGTGGTGAAGCCCAGGCTGGAGAATACCATTAGTTATATCAAGGGAGAGTTGGACGAGCTAGAAAGAGAGGATTTCTTTAAGTTGAAGAAGATACAGGGTTATAAGAAAAGAGAAATAGAGAAGCAGATGCAGTCAACTAAGCAATTTGCTGAGGAACAGGTTGCTGAGAAGCTGGCATTGCAGAAAGGAATTTCAATGAATTCAGCTCACAACTTGTTGTCTGCAACAACAGCGAAAGATGAGGATATCATTTTCTGA 513 0.4288 MKTSSFALTEAKYVAGDSIKHVMLENVREASLKVLSRQENVAGVKLPKFEYTSDGEITKSDLTDIVPALDEAIKTTNRRVNALENVVKPRLENTISYIKGELDELEREDFFKLKKIQGYKKREIEKQMQSTKQFAEEQVAEKLALQKGISMNSAHNLLSATTAKDEDIIF 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0094 170 Coils Coil 88 108 - -
Glsi06g0094 170 PANTHER V-TYPE ATP SYNTHASE SUBUNIT D 1 65 IPR002699 GO:0046961
Glsi06g0094 170 Gene3D - 1 63 - -
Glsi06g0094 170 Gene3D - 64 131 - -
Glsi06g0094 170 Pfam ATP synthase subunit D 1 54 IPR002699 GO:0046961
Glsi06g0094 170 Pfam ATP synthase subunit D 67 117 IPR002699 GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0094 Glsi-ChrGlsi06 708243 708844 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0094 1 170 Primary Pumps ATPases(2) AT3G58730 61.500 9.49e-82 241