Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0089 ATGGATTATCCATCATGGGTTAACACTTCCTTGGACCTCAACATTAACCCTTGCAGAGTTGATGAAGACGTTCCTGTAAGTAAAATATATCATCTCATTCTCATCTTGCCTGTGTGCCCAGAAGCTCGATCTTCTAAAAAGGAGGTGGAAAGTGTGCGGAAGTCTCCTTCAAAACAAGAGTCCAGTGGTGAGTTGGAAGAGGAACTGAAGCGGGTGAGTGCGGAAAACCGGAAGTTGACCGAAATGCTCAAAGAGATGTGTGAGAACTACAATACTTTGCGAAGCCACTTGATGGAATACATGAGAAACAATCCGGAAAAGGAGCTAAGCCCATCAAAGAAAAGGAAGTCTGAAAGTAGCAATAACAATAGCAATCCAATGGGGGTTAATGGAAACTCTGAGAGCAGCTCAACTGATGAAGGATCAAGAAAAGAGATCATCAAACCAAAAATTTCAAAAGCATACGTCAGGACCGAAGCATCAGATACAAGCCTTATTGTAAAGGATGGATATCAGTGGAGAAAATACGGGCAAAAGGTGACCAGAGACAATCCTTGTCCAAGAGCATACTTCAAATGCTCTTTTGCTCCAAGCTGCCCCGTCAAAAAGAAGGTCCAAAGAAGTGTGGATGATCAATCCGTTATGGTAGCAACTTATGAAGGGGAGCACAATCATCCTCGTCCTTCTCAGATGGAGGCAGCATCAGATTCCAGCCGTGGTGTGACCCTAGGAGTAGTACCTAATTCAGCGTCTCTGAGCCCATCCCCTCCTAAAGTTACCCTTGACATGACAAAATCTAAGTCCTGCAGCAACGAATCCAAGAGCCCAAAACCAAAAAATGATTCGCCGGAAGTACCGCAGGTTCTGGTGGAACAGATGGCTACTTCCTTAACCAAGGATCCCAATTTCAGAGCAGCACTTCTTGCAGCCATTTCAGGAAGAATGTCGCACAAGAGTTAG 960 0.4469 MDYPSWVNTSLDLNINPCRVDEDVPVSKIYHLILILPVCPEARSSKKEVESVRKSPSKQESSGELEEELKRVSAENRKLTEMLKEMCENYNTLRSHLMEYMRNNPEKELSPSKKRKSESSNNNSNPMGVNGNSESSSTDEGSRKEIIKPKISKAYVRTEASDTSLIVKDGYQWRKYGQKVTRDNPCPRAYFKCSFAPSCPVKKKVQRSVDDQSVMVATYEGEHNHPRPSQMEAASDSSRGVTLGVVPNSASLSPSPPKVTLDMTKSKSCSNESKSPKPKNDSPEVPQVLVEQMATSLTKDPNFRAALLAAISGRMSHKS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0089 319 Gene3D WRKY domain 151 229 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi06g0089 319 ProSiteProfiles WRKY domain profile. 162 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi06g0089 319 FunFam WRKY transcription factor 40 152 229 - -
Glsi06g0089 319 MobiDBLite consensus disorder prediction 230 271 - -
Glsi06g0089 319 MobiDBLite consensus disorder prediction 105 145 - -
Glsi06g0089 319 SMART WRKY_cls 167 227 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi06g0089 319 Pfam WRKY DNA -binding domain 168 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi06g0089 319 Coils Coil 62 89 - -
Glsi06g0089 319 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 53 315 IPR044810 GO:0003700
Glsi06g0089 319 MobiDBLite consensus disorder prediction 116 137 - -
Glsi06g0089 319 MobiDBLite consensus disorder prediction 221 302 - -
Glsi06g0089 319 MobiDBLite consensus disorder prediction 45 69 - -
Glsi06g0089 319 SUPERFAMILY WRKY DNA-binding domain 164 228 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0089 Glsi-ChrGlsi06 692769 694086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0089 5 315 WRKY Transcription Factor Family AT1G80840 49.848 3.00e-93 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi06g0089 WRKY 4.8e-23 CL0274