Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0085 ATGTCTCTGAAGATAGCGGGTGAGAGTTGGTCAGAACCACCATTACAGACGGTGGAGGAGATATTGGAGGTGGTGGTGGTAAGAGAATATGATGAAAAGAGACACAAGGTGGCCGTAGAGAAAATGGAGAGGCTTTGTGAAGTTGGGCAGAGGGGAAAGCCATCTCTTGTGGCTGACCTTATGGGCGACCCCATATGCCGTATCCGTCACTTCCCAATACATATAATGCTGGTTGCAGAATATGGTGAAGAGGGAGAAATTGTTGGGGTGATAAGGGGATGTGTAAAAACAGTTTCAAGAGGGAGTTCAGTTTATGTAAAGCTGGCTTATCTTTTGGGTCTCAGGGTCTCCCCTACACACAGGAGATTCGGCATTGGCACAAAATTGGTCGAACATTTAGAGGAGTGGTGCAAGCAAAAGGGGGCTAAGTATGCATATATAGCAACTGATTGTACCAATGAGCCTTCCATCAATTTGTTCACAAAAAAATGTGGGTACTCAAAGTTCAGAACTCTAACCATGCTGGTGCAGCCTGTTCATGCTCACTACAAACCAATAAGCTCAAGCATAGCCGTGGTTCGCCTTCCACCACGCCTAGCCAAATCCATGTATAACCATATGTTTGCCAATTCAGAATTTCACCCTAAAGACATGGAGTTAATTTTGTCTAACAAGCTTAATCTAGGCACTTTCATGGCCATCCCCAAGAAGTACCTGCCCAAATGGGATCCAAAAACAGGCATTCTTCCTCCAAGTTTTGCCATATTAAGTGTGTGGAACACCAAGGAAGTGTTCAAATTGCAAGTGAAGGGGGCGTCACCCCTAGCACACGCCTGCTGTGTAGGGACAAGGTTATTGGATGCGTGGATGCCATGGCTGAGGCTACCTTCCTTCCCTGATGTGTTTAGGCCGTTTGGGATTTATCTTTTGTACGGATTATACATGGAAGGGAAGAATGGTAGGCTTCTCATGAGGTCTCTATGTGCATTTGTGCATAACATGGCTAGGGATGATGGTGGTTGTGGGGCCATCGTGGCTGAATTGGGCCAAAGGGACCCAGTTACAGAGACAGTCCCACATTGGAGGAAGTTTTCCTGGGCGGAGGACATGTGGTGCATTAAGAAACTTGACGAGAAATGTGGGCCGTCCGATTGGATTACATCTAGATCCTCTTCACCAGTAATTTTCGTTGATCCTCGTGATTTTTGA 1209 0.4624 MSLKIAGESWSEPPLQTVEEILEVVVVREYDEKRHKVAVEKMERLCEVGQRGKPSLVADLMGDPICRIRHFPIHIMLVAEYGEEGEIVGVIRGCVKTVSRGSSVYVKLAYLLGLRVSPTHRRFGIGTKLVEHLEEWCKQKGAKYAYIATDCTNEPSINLFTKKCGYSKFRTLTMLVQPVHAHYKPISSSIAVVRLPPRLAKSMYNHMFANSEFHPKDMELILSNKLNLGTFMAIPKKYLPKWDPKTGILPPSFAILSVWNTKEVFKLQVKGASPLAHACCVGTRLLDAWMPWLRLPSFPDVFRPFGIYLLYGLYMEGKNGRLLMRSLCAFVHNMARDDGGCGAIVAELGQRDPVTETVPHWRKFSWAEDMWCIKKLDEKCGPSDWITSRSSSPVIFVDPRDF 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0085 402 CDD NAT_SF 76 147 - -
Glsi06g0085 402 Pfam Acetyltransferase (GNAT) family 70 166 IPR000182 GO:0016747
Glsi06g0085 402 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 65 172 IPR016181 -
Glsi06g0085 402 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 23 402 - -
Glsi06g0085 402 FunFam Putative N-acetyltransferase HLS1 40 171 - -
Glsi06g0085 402 Gene3D - 22 171 - -
Glsi06g0085 402 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 25 200 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0085 Glsi-ChrGlsi06 669174 671292 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Glsi06g0085 Acetyltransf_1 2.8e-19 CL0257