Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0078 ATGGCATTCAGAGCTAGTGCTGCTCATTTTGGCAGGGCTGCTTTTGCGGCAGCTTCCCGGTATAAGAAAACCCAGAACAATGTGTTTGAAGTGAACCAAACTGGTTACGACAACTGCACCACTGAAGGAGCTGTTGGGAATTGGAGTAGTGGCAAAAATTTCATATACCTGAATAAGGCCAAGAGGTATTACTTTATTTGTGGCAATATCCAATGCTTAAATGCGATGAAGGTCTCACTTCTTGTCCATCCTCTTCCTCCTTCTCCTACATCTGCTGCAATTGCTGATGAGCATTTATAA 300 0.4333 MAFRASAAHFGRAAFAAASRYKKTQNNVFEVNQTGYDNCTTEGAVGNWSSGKNFIYLNKAKRYYFICGNIQCLNAMKVSLLVHPLPPSPTSAAIADEHL 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0078 99 ProSiteProfiles Phytocyanin domain profile. 1 84 IPR003245 GO:0009055
Glsi06g0078 99 PANTHER BLUE COPPER PROTEIN 20 80 IPR039391 GO:0009055
Glsi06g0078 99 SUPERFAMILY Cupredoxins 20 83 IPR008972 -
Glsi06g0078 99 Pfam Plastocyanin-like domain 20 70 IPR003245 GO:0009055
Glsi06g0078 99 Gene3D - 11 85 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0078 Glsi-ChrGlsi06 638175 639049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0078 21 96 Phytocyanin Superfamily AT5G15350 35.897 8.91e-16 67.0