Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glsi06g0075 | ATGGCAGACCTCCAAGAGCGGCTACTCCCACCAAAACCTGCATCAGCTCTTAATTTAAGAGAGGCAGCAGTCAATCGACCATCAGCATCTGGGAGGCAACCTTTTCAAGGGGTAGATGTTCTGGGGCTAAAGAAGCGGGGTCAAGGTCTCCGATCTTGGATTCGTGTTGACACATCTGGAAATTCTCAAATTATTGAGGTAGACAAGTTCACTATGATGCGACGTTGTGATCTTCCTGCTCGTGATCTTCGCCTTCTTGATCCTCTGTTTGTGTACCCTTCAACAATCCTTGGTAGAGAAAAGGCTATTGTTGTAAATCTCGAGCAGATACGGTGTATTATTACAGCAGATGAGGTTCTTCTCTTGAATTCCCTAGATAGTTATGTCTTGCACTATGTGATGGAGCTACAACGCCGACTGACTACAACTGGGGTAGGCGAGGTTTGGCAGTCAGACAATGGTGACATTAGCCGAAGGAGAGGAAGTAGAAATTTTAACGATGTCTTTAGCAACACGTCCCCTGATTATTTGCCTTTTGAGTTCAGAGCTCTTGAAGTTGCCCTGGAGGCGGCATGCACATTTCTTGACTCTCAGGCAGCAGAGTTAGAAATCGAGGCTTATCCGCTACTGGATGAATTAACATCAAAGATCAGTACACTAAATTTGGAACGTGTTCGTCGGTTGAAAAGCAGACTTGTTGCCCTGACTAGGAGAGTTCAGAAGGTTAGAGATGAAATAGAGCAGCTTATGGATGACGATGGTGATATGGCTGAAATGTATCTTACTGAGAAGAAAAGGCGGATGGAGTCATCATTTTGTGGAGACCAGTTTTTGGTTGGATATAGATCAGTTGATGTTGCATCCATTTCTGCTCCAGTTTCTCCTGTTTCATCTCCTCCTGATGCTCGGAAACTTGAAAAGTGCTTGAGCATTGCAAGGAGTAGACACGAGAGCATGAGGAGTACAGAAAGTACTACAGAAAGTATAGAAGAGCTTGAGATGTTGCTAGAAGCATACTTTGTTGTTATTGACAGCACCCTGAACAAGCTGACATCGTTGAAAGAATACATTGATGACACAGAAGATTTCATTAACATTCAACTGGATAATGTGCGTAATCAGCTTATCCAATTTGAGCTTTTACTCACAACCGCAACATTTGTGGTTGCCATCTTTGGCGTAGTTGCTGGAATTTTTGGGATGAACTTTGAAATCCCATTATTTGATGATCCCTCTGCTTTCCATTGGGTCCTTATAATCACAGGAATTTGTGGGATCTTCATATTTTGTGCGTTTGTGTGGTTCTTCAAGTACAGAAGACTCATGCCCCTGTAG | 1335 | 0.433 | MADLQERLLPPKPASALNLREAAVNRPSASGRQPFQGVDVLGLKKRGQGLRSWIRVDTSGNSQIIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDSYVLHYVMELQRRLTTTGVGEVWQSDNGDISRRRGSRNFNDVFSNTSPDYLPFEFRALEVALEAACTFLDSQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKRRMESSFCGDQFLVGYRSVDVASISAPVSPVSSPPDARKLEKCLSIARSRHESMRSTESTTESIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGIFGMNFEIPLFDDPSAFHWVLIITGICGIFIFCAFVWFFKYRRLMPL | 444 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glsi06g0075 | 444 | Coils | Coil | 225 | 252 | - | - | |
| Glsi06g0075 | 444 | FunFam | Magnesium transporter MRS2-1 | 382 | 442 | - | - | |
| Glsi06g0075 | 444 | Gene3D | Magnesium transport protein CorA, transmembrane region | 131 | 375 | - | - | |
| Glsi06g0075 | 444 | Gene3D | - | 41 | 124 | - | - | |
| Glsi06g0075 | 444 | SUPERFAMILY | Magnesium transport protein CorA, transmembrane region | 381 | 434 | IPR045863 | - | |
| Glsi06g0075 | 444 | PANTHER | RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL | 19 | 442 | IPR039204 | - | |
| Glsi06g0075 | 444 | Gene3D | Magnesium transport protein CorA, transmembrane region | 382 | 442 | - | - | |
| Glsi06g0075 | 444 | FunFam | Magnesium transporter MRS2-1 | 41 | 124 | - | - | |
| Glsi06g0075 | 444 | CDD | Mrs2_Mfm1p-like | 53 | 441 | IPR039204 | - | |
| Glsi06g0075 | 444 | Pfam | CorA-like Mg2+ transporter protein | 333 | 435 | IPR002523 | GO:0016020|GO:0030001|GO:0046873|GO:0055085 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Glsi06g0075 | Glsi-ChrGlsi06 | 628034 | 630826 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Glsi06g0075 | 1 | 444 | MRS2 Gene Family | AT1G16010 | 85.135 | 0.0 | 757 |