Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0071 ATGGGGGTATACCTCAGCACCCCGAAAACAGAAAAGGCCTCTGAAGATGGCGATAATGGCAGGGTTCGCTATGGCTTATCTTCCATGCAGGGGTGGCGTGCAACCATGGAAGATGCTCATGCAGCCCATCCAGATTTGGACGAGTCCACATCTTTTTTTGGTGTTTATGATGGCCATGGAGGTAAAGCAGTTGCTAAATTTTGTGCCAAGTATCTACACCAACAAGTTCTTAAGCATGAAGCTTATTTAGCTGGAGATTTAGGCACAGCTTTACAAAAATCTTTTCTCAGGATGGATGAGATGATGCGTGGACAAAGAGGGTGGAGAGAATTAGCAGTCTTGGGAGATAATATAGAAAAGTTTTCTGGTATGCTGGAGTGCTTTATATGGTCTCCCAAGAGTGGTGAAGTCAATGACCATGTTGATGATTGGGCTTTTGAGGAGGGGCCCCATTCTGGTTTCAGTGGACCAAACTCTGGATGCACAGCTTGTGTTGCAGTCATCCGAGGCAACCAGCTTGTTGTTGCAAATGCTGGTGATTCTCGCTGTGTATTATCGAGGAAGGGCCAGGCACATAATTTATCTAAAGATCACAAGCCCGACCTTGAAGTTGAGAAGGACAGGATTTTAAAAGCTGGTGGCTATGTACAATTTGGACGGGTCAACGGAAGTTTAAACTTGTCTAGAGCAATTGGGGACATGGAATTCAAGGATAGCAAGCATTTGCCTGCTGAAAAGCAGATTATAACTGCTGATCCAGACATAAATTCTGTTGAGCTTTGCTATGATGATGAGTTTCTTGCAATAGCTTGTGATGGAATATGGGATTGCATGTCAAGCCAACAGCTGGTGGACTTCATTCATGGACAGTTAAAGACAGAGAATAAACTTTCTGTGGTTTGCGAGAGAGTATTTGATAGGTGCTTGGCACCAACTGTTGGTGGTGTGGGATGTGACAACATGACCATGATCTTGATTCAGTTCAAATGGCCTTCGAATCCAGGTGCTTCTGTCATGGACCGGCCTCTGTCATCTGCTCAACCATCGGAGTCTGATAAAAGTTCAGGAGAAATGGAGTCGAAGTGA 1086 0.4475 MGVYLSTPKTEKASEDGDNGRVRYGLSSMQGWRATMEDAHAAHPDLDESTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYLAGDLGTALQKSFLRMDEMMRGQRGWRELAVLGDNIEKFSGMLECFIWSPKSGEVNDHVDDWAFEEGPHSGFSGPNSGCTACVAVIRGNQLVVANAGDSRCVLSRKGQAHNLSKDHKPDLEVEKDRILKAGGYVQFGRVNGSLNLSRAIGDMEFKDSKHLPAEKQIITADPDINSVELCYDDEFLAIACDGIWDCMSSQQLVDFIHGQLKTENKLSVVCERVFDRCLAPTVGGVGCDNMTMILIQFKWPSNPGASVMDRPLSSAQPSESDKSSGEMESK 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0071 361 MobiDBLite consensus disorder prediction 1 20 - -
Glsi06g0071 361 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Glsi06g0071 361 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Glsi06g0071 361 Pfam Protein phosphatase 2C 157 313 IPR001932 -
Glsi06g0071 361 ProSiteProfiles PPM-type phosphatase domain profile. 23 328 IPR001932 -
Glsi06g0071 361 Gene3D - 1 329 IPR036457 -
Glsi06g0071 361 SMART PP2C_4 13 326 IPR001932 -
Glsi06g0071 361 SUPERFAMILY PP2C-like 3 330 IPR036457 -
Glsi06g0071 361 MobiDBLite consensus disorder prediction 338 353 - -
Glsi06g0071 361 CDD PP2Cc 22 328 IPR001932 -
Glsi06g0071 361 MobiDBLite consensus disorder prediction 337 361 - -
Glsi06g0071 361 PANTHER PROTEIN PHOSPHATASE 2C 18 327 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0071 Glsi-ChrGlsi06 616468 622108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0071 1 337 PP2C-type Phosphatase Gene Family AT2G25070 72.781 0.0 536