Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0070 ATGATACTTCCTCAGTTGCTCTGGTATATTAGAGTTGAACCAGCGACTGCCACGCGCCAGATTACTACCCTGGCGGCTGGCGCTAACCGTGACGACGGCGTTCAATTGGAAGAGCGACCATACAGAAAACGTCGCCCACCCTGTGAGTCACCCAACCTCTTCTTACTTGGCTTAAATTGGACGGGAACCCTCTCGCTCTCCCACTCGACACTTCTCGCACCAAACCGATTTCCCTATATTACCCTCTCTCTTTACTCCCTTCCTTCCCAAGTTTCTGCCATTTCCGTGAGGCCCACATCCCGCCTAAGGTTGCCAGGGTCGCGCGAGATGATAATCAACGTCAAGCAGTCGACGATGGTACGACCGGCGGAGGAGACGCCGCGGCGGGCGCTGTGGAACTCCAACGTAGACCTGGTGGTGCCCAACTTCCACACGCCCAGCGTGTACTTCTACAGGCCCACGGGTGCCTCGAATTTCTTTGACGCCAAGGTTCTGAAGGAGGCTCTGAGCAAGGCTCTGGTACCCTTCTACCCAATGGCAGGCCGGCTCCGGCGAGACGAAGACGGTCGTGTGGAGATTGATTGCAACGGCGAAGGGGTGCTCTTCGTCGAGGCCGAGACCACCGGCGCCATCGATGATTTCGGCGACTTTGCTCCCACCCTTGAGCTCCGGCAACTTATCCCCGCCGTGGATTATTCGGGCGGAATCGAAACGTACTCATTGTTAGTGTTGCAGGTAACGTATTTTAAATGTGGGGGGGTCTCGCTTGGTGTTGGTATGCAACACCATGCCGCAGATGGATTTTCTGGTCTCCACTTTATCAATACATGGTCAGATATGGCTCGTGGCCTGGATCTTACCATCCCACCATTCATTGATCGGACACTACTCCGAGCCCGAGATCCACCTCGACCTGTTTTTGAGCACATTGAATACAAGCCCCCTCCAGCCATGAAGACTTCTCTGCAACCCACAAAACCAGGTGCAGACAGTACTGCGGCAGTTTCTATTTTCAAATTGACCCGTGATCAGCTCAACATACTCAAAGCCAAGTCTAAAGAAGATGGCAACACAATCAGCTATAGCTCTTATGAGATGTTGGCTGGTCATGTGTGGAGAACTGTGTGCAAGGCACGAGCACTTCCTGATGATCAAGAGTCCAAATTGTACATTGCAACTGATGGACGGTCAAGGTTGCAGCCACCCCTCCCACCAGGTTACTTTGGCAATGTCATATTCACAACCACACCAATAGCTATGGCAGGTGATCTCATGTCAAAACCAACATGGTTTGCTGCTAGCAGAATTCATAATGCACTGTCACGAATGGACAACGAATATTTGAGATCAGCTCTGGACTATCTAGAGCTTCAACCTGATCTTAAAGCTCTTGTTCGAGGAGCACATACTTTCAGGTGTCCAAATCTTGGCATCACCAGCTGGGTTAGGCTCCCAATCCATGACGCTGATTTCGGGTGGGGACGGCCAATATTCATGGGTCCTGGTGGGATTGCATATGAGGGGCTATCTTTTATAATACCAAGCTCAACAAATGATGGGAGTCAATTTGTGGCAATTGCTCTCCCGCCCGAGCAAATGAAAGTGTTTCAGGAATTGTTGTATAAAATTTGA 1632 0.511 MILPQLLWYIRVEPATATRQITTLAAGANRDDGVQLEERPYRKRRPPCESPNLFLLGLNWTGTLSLSHSTLLAPNRFPYITLSLYSLPSQVSAISVRPTSRLRLPGSREMIINVKQSTMVRPAEETPRRALWNSNVDLVVPNFHTPSVYFYRPTGASNFFDAKVLKEALSKALVPFYPMAGRLRRDEDGRVEIDCNGEGVLFVEAETTGAIDDFGDFAPTLELRQLIPAVDYSGGIETYSLLVLQVTYFKCGGVSLGVGMQHHAADGFSGLHFINTWSDMARGLDLTIPPFIDRTLLRARDPPRPVFEHIEYKPPPAMKTSLQPTKPGADSTAAVSIFKLTRDQLNILKAKSKEDGNTISYSSYEMLAGHVWRTVCKARALPDDQESKLYIATDGRSRLQPPLPPGYFGNVIFTTTPIAMAGDLMSKPTWFAASRIHNALSRMDNEYLRSALDYLELQPDLKALVRGAHTFRCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSSTNDGSQFVAIALPPEQMKVFQELLYKI 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0070 543 Gene3D - 325 543 IPR023213 -
Glsi06g0070 543 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 116 540 - -
Glsi06g0070 543 FunFam Spermidine hydroxycinnamoyl transferase 110 312 - -
Glsi06g0070 543 Pfam Transferase family 112 538 - -
Glsi06g0070 543 FunFam Tryptamine hydroxycinnamoyl transferase 319 541 - -
Glsi06g0070 543 Gene3D - 106 314 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0070 Glsi-ChrGlsi06 607778 615955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0070 110 543 Monolignol Biosynthesis Gene Families AT5G48930 79.032 0.0 726