Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0051 ATGAAGGAAACGGAGAAAAAGAAGTATCCCATTGGGCCTGAGCATTATGCTCTGTATGAGGAGGTTGGCCAAGGTGTAAGTGCTTATGTGCACCGTGCTCTTTGCGTACCATTGAATGAGATCGTTGCCATTAAAATCCTTGATTTTGAACGTGACAACTGCGACCTGAATAACATTTCTCGTGAAGCACAGACCATGATCTTGGTTGACCATCCTAATGTCCTTAAGTCACACTGCTCCTTTGTTAGTGGTCATAATCTGTGGGTTGTCATGCCATACATGTCTGGCGGTTCCTGTCTTCATATATTGAAAGCTGCCTACCCTGATGGTTTTGAGGAGGTTGTAATAGCTACAATATTGCGAGAGGTATTAAAGGGTTTAGAGTACCTTCATCATCATGGGCATATACATAGAGATGTCAAAGCTGGGAACATTCTAATTGATGCACGTGGTGCAATCAAGCTTGGGGATTTCGGTGTATCTGCTTGTCTTTTTGATTCAGGTGACAGGCAACGCACAAGGAATACATTTGTGGGGACACCTTGCTGGATGGCACCTGAGGTCATGGAGCAACTGCATGGTTATGATTTCAAAGCTGATATCTGGTCATTTGGTATAACTGCATTGGAGCTTGCCCATGGTCATGCTCCTTTCTCAAAGTATCCACCAATGAAGGTATTGCTTATGACATTGCAAAATGCACCCCCAGGCCTTGATTATGAAAGGGATAGGAAGTTCTCTAAGTCATTTAAGCAAATGATTGCTAGCTGCCTGGTAAAAGATCCTTCAAAACGACCCTCAGCGAGTAAGTTGTTAAAGAATTCCTTCTTTAAGCAGGCTCGCTCAAATGATTATATTGCACGAACACTTTTGGAGGGGCTTCCTGCTTTAGGTGATCGTATGAAGGCCCTGAAGAGAAAAGAAGAAGATATGCTTGCACAAAAGAAAATGCCTGATGGGCAGATGGAGGAATTATCACAGAATGAATACAAGCGAGGAATTAGTGGCTGGAACTTCAATCTTGAAGATATGAAAGCTCAGGCTTCATTGATCCAGGATTTTGATGACCCAATGGTATCTGATACCAGTGTAGGAGGAAGTTCAAATTCTTTATCTACACTTGATCCACAAGATAAGCAATCACTAAGTCAAAACCCCTCTCAAATTGCAGATATGGAATATAATGATGAGGTGCAAAATCAATCAGCTTCTGTTCCTTTAGTGGATTCCACAGCAATTGATGCCAAGTTTAGATGTGAAAAATCTGATGATGACTCTAGTATCACCTGTTCAAGCTATGAACATAACTTTTCACAGAGCTCTTCACCCTATCTTGATGATCATATGGTGGACTATATATTGGGTGAAAAAGTTGATATGGAGAATGGTGGAAGGCACGTGGAGGGCATTGCTATTCCTTCTCATCATAGAAGAGGAAGCTCATCAAGCATTTTACATGAAGTTATTCTTCCACCTATTCGAGGAGAAAGCGAGAAGGTACAAAATCAGCCTCAGAACATTTCAACTTGCAATGCATCATTGGTTTCACAGACAGGAGATGATGCGCTTTCTGAACTTCATTCTAAAGCTTCAAAATCGTCAGTTAATACCGATGACCCTGATGAGAAAGTAAAGGTACCAGTTGTTCAGCAGAGAGGACGCTTTAAGGTTACATCTGAGAATGTTGACTTAGAAAAGGTGGGACCATCTCCTGTACTGCAAAAGAGTCAAAGCATGCAGATTATTAGCCCAAACAATGCAGCTCCTGTACCATCAACTTTACCATTATCATCAGCATCTGATGCTGCGTCATCAAATCATTCTGGCTCTTCTCTTTTCCCAGTGTTGCATTCTGTGCTGCAGACAAATATTCTTCAAAGGGACAGGATTTTAAGTTTAATGAAGCAAATTACTGCTGCTGACTCCACAGCTGATGGAGCATGCACTCCAGCACAGATTGCAGCAATTGAGAAATCTTTGCTTGAAGAAGCTCATGAAAGGGAGAAAGAGCTAGTTCACGAGATAAATGAGTTGCAGTGGAGGTGTGATTGCACTGTCCGAATGGATACTTGGAATAGGATTTCGGAGGCGGTTCCATTGTTCAATTAGGTGAGAGAGGGAGAGAGAGAGAGTGTGTGGGAAATGTCCGGGGAAATGGTTTATGTGGAGCACCGAACGGGTGCAAATGGCCTCGAGAAGATCGTTCTCAGAGAAGTTCGTGGCTTTTCTGCTGAGGTGTATCTATATGGGGGTCAAGTTACGTCCTGGAAGAATGAACTTGGGGAGGAGTTGCTCTTTGTAAGTAGTAAGGCTAATTTTAAGCCTCCAAAAGCTATACGTGGAGGTATTCCAATATGTTTTCCTCAATTTTCAAATCATGGCTCTCTTGAACATCATGGATTTGCAAGGAACAGGGTCTGGACCTTAGATCCTAATCCCCCACCATTTCCAACAGTTAGCACCAATAAGGCTTTCATTGATTTGATTCTTAGGCCCTCTGAAGAAGATACAAAGATTTGGCCTCACAGATATGAGTTTCGCCTAAGGATAACCTTGGGACCTGGGGGAGATTTGATGTTGACATCCCGTATTCGAAATACAAATACAGATGGGAAATCATTTACCTTCACATTTGCCTATCATACATATCTTTTTGTTACTGACATCAGTGAAGTGCGGGTAGAAGGACTTGAGACAATGGATTATCTGGACAACCTGAAGAATAGAGAACGGTTTACTGAACAAGGGGATGCAATAACATTTGAGTCTGAGGTGGACAAAGTATACTTAAGTACCCCCACAAAAATTGCTATCATTGACCATGAGAGAAAGAGAACTTTTGTATTGCGGAAAGATGGACTTCCAGATGCTGTGGTATGGAACCCGTGGGACAAGAAAGCAAAGACCTTAGCTGATTTTGGGGATGATGACTACATGCGCATGCTCTGTGTTCAGGCTGCTTGCGTAGAAAAGCCTATCACTCTCAAACCTGGTGAAGAATGGAAGGGGAGGCAAGAAATATCAGCAGTTCCTTCCAGTTATTGCAGCGGTCAACTTGACCCACAAAAAGTACTTCTTTTTGGAACCCTTTGCATTAATGGTGCTTTTGGCGAATCAATTATCAGCAAAATTGTCCATATTAGCCTTGAGTATGGTCAGCGTGGGTCAGAGTTGAAGCGGGCTAAGGAAAAAGAGATGGGTATTTGTAAATCCGTAGAACTTTTTTCCATTGGGAGAGGAGAAGCACCTGTGGATGCATATCTGTCCGATTAA 3273 0.4241 MKETEKKKYPIGPEHYALYEEVGQGVSAYVHRALCVPLNEIVAIKILDFERDNCDLNNISREAQTMILVDHPNVLKSHCSFVSGHNLWVVMPYMSGGSCLHILKAAYPDGFEEVVIATILREVLKGLEYLHHHGHIHRDVKAGNILIDARGAIKLGDFGVSACLFDSGDRQRTRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSASKLLKNSFFKQARSNDYIARTLLEGLPALGDRMKALKRKEEDMLAQKKMPDGQMEELSQNEYKRGISGWNFNLEDMKAQASLIQDFDDPMVSDTSVGGSSNSLSTLDPQDKQSLSQNPSQIADMEYNDEVQNQSASVPLVDSTAIDAKFRCEKSDDDSSITCSSYEHNFSQSSSPYLDDHMVDYILGEKVDMENGGRHVEGIAIPSHHRRGSSSSILHEVILPPIRGESEKVQNQPQNISTCNASLVSQTGDDALSELHSKASKSSVNTDDPDEKVKVPVVQQRGRFKVTSENVDLEKVGPSPVLQKSQSMQIISPNNAAPVPSTLPLSSASDAASSNHSGSSLFPVLHSVLQTNILQRDRILSLMKQITAADSTADGACTPAQIAAIEKSLLEEAHEREKELVHEINELQWRCDCTVRMDTWNRISEAVPLFNXVREGERESVWEMSGEMVYVEHRTGANGLEKIVLREVRGFSAEVYLYGGQVTSWKNELGEELLFVSSKANFKPPKAIRGGIPICFPQFSNHGSLEHHGFARNRVWTLDPNPPPFPTVSTNKAFIDLILRPSEEDTKIWPHRYEFRLRITLGPGGDLMLTSRIRNTNTDGKSFTFTFAYHTYLFVTDISEVRVEGLETMDYLDNLKNRERFTEQGDAITFESEVDKVYLSTPTKIAIIDHERKRTFVLRKDGLPDAVVWNPWDKKAKTLADFGDDDYMRMLCVQAACVEKPITLKPGEEWKGRQEISAVPSSYCSGQLDPQKVLLFGTLCINGAFGESIISKIVHISLEYGQRGSELKRAKEKEMGICKSVELFSIGRGEAPVDAYLSD 1090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0051 1090 MobiDBLite consensus disorder prediction 518 541 - -
Glsi06g0051 1090 FunFam Serine/threonine-protein kinase BLUS1 5 93 - -
Glsi06g0051 1090 CDD D-hex-6-P-epi_like 733 1008 IPR025532 -
Glsi06g0051 1090 Coils Coil 661 681 - -
Glsi06g0051 1090 Gene3D - 729 1014 IPR014718 GO:0030246
Glsi06g0051 1090 SUPERFAMILY Galactose mutarotase-like 728 1007 IPR011013 GO:0003824|GO:0005975|GO:0030246
Glsi06g0051 1090 MobiDBLite consensus disorder prediction 356 406 - -
Glsi06g0051 1090 FunFam serine/threonine-protein kinase BLUS1 isoform X1 97 330 - -
Glsi06g0051 1090 MobiDBLite consensus disorder prediction 583 603 - -
Glsi06g0051 1090 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 5 688 IPR047173 GO:0043539
Glsi06g0051 1090 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g0051 1090 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g0051 1090 SUPERFAMILY Protein kinase-like (PK-like) 14 278 IPR011009 -
Glsi06g0051 1090 Gene3D Phosphorylase Kinase; domain 1 4 92 - -
Glsi06g0051 1090 Pfam Aldose 1-epimerase 733 1007 IPR008183 GO:0005975|GO:0016853
Glsi06g0051 1090 Gene3D Transferase(Phosphotransferase) domain 1 97 330 - -
Glsi06g0051 1090 Pfam Protein kinase domain 17 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g0051 1090 CDD STKc_OSR1_SPAK 14 277 - -
Glsi06g0051 1090 MobiDBLite consensus disorder prediction 361 406 - -
Glsi06g0051 1090 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0051 Glsi-ChrGlsi06 480392 493964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0051 5 681 MAP Kinase Kinase Kinase Kinase AT1G79640 64.723 0.0 865
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Glsi06g0051 Aldose_epim 1.2e-65 CL0103