Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0032 ATGAAAGGCCGCACCTGTGAGCTTTGTAACGATGAAGCCTCCCTCTATTGTGCTTCGGACTCTGCTTTTCTCTGTTGGAACTGCGATACCAGGGTTCACGGTGCAAACTTTCTCGTAGCTCGCCATCTTAGAGAGCTGCTCTGCCACAAGTGTAATTGTTTCGCCGGGAATCAGATATCCGGCGGTGTAGCCCTGCCTGTAACGACTCTCTGTCGTTCTTGTTCGCCGGAGAATCCTTCCGATGACGATGATTCCTTATCTTCTTCGTCATCTGTCTGCGTTTCGAGCAACGAGTCTTGCGCTACGGCTTCCAAGAACATTAGACTGAACGGTCGGCGCAAGAGAGAGGGGATCGCATCTTGTAGTTTAGTCACCAAAGTCTCCGGCGAGAAATACAATACTCCGGCGGAAGTGACATTGGCGAAAACGGTACGGCAGCAGAAGGAGAGAGAACCGAGAGAGAGAAAAGTTGGATCGCGTGCTGGGACGAGCGTAGGCGCTGTGACGGAGGAGGTTTTTCTGAATTGGAGCAGGAAGTTAGGGGTGAATAGTAATTCCGTAGCTTCATTGGCGTCGCGCGCCTTAGGATTCTGTATGGTGAAGTTGAGAGCTGTACCGTTCAGAGTGGCGGTGGCGACGTCGTTTTGGATGGGGTTGATATCATGTGGAGACAGGTCGGTGGCTCCGTTTGAGAATCTGAGAAGGTTAGAGGCGATCTCCGGAGTGCCGGGGAAGCTGATATTGGCCGCAGAGGGGAGGCTGGCACGTGTGTTGAGACAGAGCAGAGGAAAGCGCGTACTGAAAGAAGGATGGGCAGAGTGCCAAGTCTGA 831 0.5283 MKGRTCELCNDEASLYCASDSAFLCWNCDTRVHGANFLVARHLRELLCHKCNCFAGNQISGGVALPVTTLCRSCSPENPSDDDDSLSSSSSVCVSSNESCATASKNIRLNGRRKREGIASCSLVTKVSGEKYNTPAEVTLAKTVRQQKEREPRERKVGSRAGTSVGAVTEEVFLNWSRKLGVNSNSVASLASRALGFCMVKLRAVPFRVAVATSFWMGLISCGDRSVAPFENLRRLEAISGVPGKLILAAEGRLARVLRQSRGKRVLKEGWAECQV 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0032 276 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Glsi06g0032 276 Pfam B-box zinc finger 3 34 IPR000315 GO:0008270
Glsi06g0032 276 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 5 101 - -
Glsi06g0032 276 CDD Bbox1_BBX-like 6 47 - -
Glsi06g0032 276 SMART bboxneu5 1 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0032 Glsi-ChrGlsi06 363910 364740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0032 3 74 C2C2-CO-like Transcription Factor Family AT4G27310 50.000 1.80e-18 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Glsi06g0032 zf-B_box 3.4e-06 No_clan