Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g2233 ATGATTGAATTTAGAATAATCATATATTTGACCATTCAATTATGGCGATCTCATGGTCGCGAGGTTTCTTGCACAATCAATATTTTGGCATGGATTTTGAATATTCGGGTTTGTGGTTCGTCGGGTGCCGATTCCACTTTCAATCGGCATTCGATTCCTATTCAGTGGCTTGTGAGGCATTTTCTGAACAACAACGTCGTCTTCCTCAGATTCGGGTTTCGATCAAAATCGAATTGCTTTGATAGGGTTTGCGCATTTTTCTCGCGAGCAATAGAATCACCTCTTCTCTTCTTCCTAGGATTTGGTTGTCATTTTGAATCTGTGATCGCTATGGATTCCGGCACTAGTCTGTTTGTTGGCAAGTTCGAGACCGAGGATGTTGATGTTGTCGAGAAAGATCCAATCGGACGATATATTCGGTATGATGATATGTTGGGGAAAGGAGCATTCAAGATTGTGTACGACTCTGAGACTTATCTTCTTTTAATGTTCAAATATAAGGCATTTGATGAAGTTGATGGGACTGAAGTTGCCTGGAACCAAGTGAATATTGAGGATGTTATGCTGTCACCGCTGCAATTGGAAAGATTATATTCTGAGGTGCATCTCCTAAAGTCATTGAAACATGGGAACATCATCAAGTTCTATAATTCTTGGGTGGATGATACAAGCAAGACTATCAACATTATAACTGAGTTATTCACCTCTGGGAGTTTGAGGAAATATCGAAAGATGCATAAGAATGTTGATATGAAGGCCATCAAGAACTGGGCAAGGCAAATTCTTCGAGGTCTATGCTATTTGCATGGTCACAATCCACCTATAGTCCATAGAGATTTGAAATGTGATAATATTTTTATTAATGGTAATAATGGAGAAGTTAAGATTGGAGATCTTGGATTGGCTATTGTCATGCAGCAGCCTACTGCCCGAAGTGTTATTGGAACACCGGAGTTTATGGCCCCAGAGCTTTATGAAGAAGAATACAATGAACTTGTTGACATATATTCTTTTGGCTTGTGTATGTTAGAAATGATCACTTGTGAGTACCCATATAGTGAATGTAAAAATCCGGCACAGATATATAAGAAAGTTACCTCTGGCATCAAGCCTGCTTCCCTTGCTAAAGTGAATGATCCCCAAGTGAAGCAATTCATAGAGAAGTGTTTGGTTCCAGCATCTCTGAGACTGCCCGCATCTGAGCTATTGAAGGATCCATTCCTTGCCACTGACAATGTAAAGGAGATTAATCATGATATACTGCAGTTGCCTAATCCTACAACCAAATTGGTGACTCCACCAATATCTGAGCCTCGTCCCATGGAGACAAACCCACACTTCAAGGATGTTTTGCCTGGCTTGTGTGTGGAAGTTGTTGAAGAAACTTATCAAGTCTCAACATTAAACATCCTGAGGATGACTGAGATGAATGAATTCAGGTTAAGAGGGGAGAAAAATGCTGCAGATAGTACAATTTCACTAACTCTGCGCATTGCTGATGCAAATGGTCGTGCAAGGAATATCCACTTTCCATTCTATCTTGATTCTGATACGGCAATTTCAATTGCTGAGGAGATGGTAGAACATCTAGATCTCACTAATGAGGATGTGGCTGTCATTGCTGAGCTAATACGCAACATGATTGTGAAGCTCGTACCCAACTGGATAGCATCACATCAGTATTTATCATCCGGAGCAGATCATTTATGCAGGCATTCTCCTGTAGTTCAGGATGTTGGAACATCTTTCAGGTGCCATATTGACGAGGATATTGTTCACTCGCAGCTTGTTGATGAGGAAGATCAAGAGAAACATGAATCAGTTATGTCAGTTATTTCAGCAGAGGAGGGGATTACAATCGCCTCAGATGCTATAAGCTTAGAACCTGATTATTTTATTTTTGGTGAATGCTGTGAGGGCTCCAACGGCAACAGCTTCATTTCAGATGTCAGGTTATATGATCAAGATGGACGTAAGAGTGAAGCTAATGGTGGGGGATCTGTTAACATGAATGATTCGGAGAGGAACTCAGATAACAATGAATCAGAGAGGAACTCAGTTAACAATGAATCAGAGAAGAACTCAGATGTCTCCTTTATTGATTCATGTAGCAATGTTTCCAAAAACATTGACATGTCAAGCATCTATTCTCTTTCTCTCGCTGATAAAGATCAATCTGATGAGCTGCAGCTGGAGCTTGATGCAATAGAAATACAGTATTGCCAATGCTTTCTTGAGCTTGTAAAGATGAGGGAGGAAGCTATAGAAAACGCAAAAAGGAAATGGATAACAAGCAAGTAA 2301 0.4024 MIEFRIIIYLTIQLWRSHGREVSCTINILAWILNIRVCGSSGADSTFNRHSIPIQWLVRHFLNNNVVFLRFGFRSKSNCFDRVCAFFSRAIESPLLFFLGFGCHFESVIAMDSGTSLFVGKFETEDVDVVEKDPIGRYIRYDDMLGKGAFKIVYDSETYLLLMFKYKAFDEVDGTEVAWNQVNIEDVMLSPLQLERLYSEVHLLKSLKHGNIIKFYNSWVDDTSKTINIITELFTSGSLRKYRKMHKNVDMKAIKNWARQILRGLCYLHGHNPPIVHRDLKCDNIFINGNNGEVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYEEEYNELVDIYSFGLCMLEMITCEYPYSECKNPAQIYKKVTSGIKPASLAKVNDPQVKQFIEKCLVPASLRLPASELLKDPFLATDNVKEINHDILQLPNPTTKLVTPPISEPRPMETNPHFKDVLPGLCVEVVEETYQVSTLNILRMTEMNEFRLRGEKNAADSTISLTLRIADANGRARNIHFPFYLDSDTAISIAEEMVEHLDLTNEDVAVIAELIRNMIVKLVPNWIASHQYLSSGADHLCRHSPVVQDVGTSFRCHIDEDIVHSQLVDEEDQEKHESVMSVISAEEGITIASDAISLEPDYFIFGECCEGSNGNSFISDVRLYDQDGRKSEANGGGSVNMNDSERNSDNNESERNSVNNESEKNSDVSFIDSCSNVSKNIDMSSIYSLSLADKDQSDELQLELDAIEIQYCQCFLELVKMREEAIENAKRKWITSK 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g2233 766 Gene3D Transferase(Phosphotransferase) domain 1 234 416 - -
Glsi05g2233 766 Gene3D Phosphorylase Kinase; domain 1 123 232 - -
Glsi05g2233 766 MobiDBLite consensus disorder prediction 658 693 - -
Glsi05g2233 766 Pfam Protein kinase domain 166 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g2233 766 ProSiteProfiles Protein kinase domain profile. 139 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g2233 766 Coils Coil 670 690 - -
Glsi05g2233 766 Gene3D - 490 565 - -
Glsi05g2233 766 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 123 696 - -
Glsi05g2233 766 MobiDBLite consensus disorder prediction 676 690 - -
Glsi05g2233 766 SMART serkin_6 139 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g2233 766 FunFam probable serine/threonine-protein kinase WNK9 234 413 - -
Glsi05g2233 766 SUPERFAMILY Protein kinase-like (PK-like) 131 408 IPR011009 -
Glsi05g2233 766 CDD STKc_WNK 137 408 - -
Glsi05g2233 766 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 492 548 IPR024678 GO:0004674|GO:0005524
Glsi05g2233 766 ProSitePatterns Serine/Threonine protein kinases active-site signature. 275 287 IPR008271 GO:0004672|GO:0006468
Glsi05g2233 766 FunFam Probable serine/threonine-protein kinase WNK1 123 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g2233 Glsi-ChrGlsi05 68502124 68506951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g2233 111 766 MAP Kinase Kinase Kinase AT5G41990 51.672 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Glsi05g2233 Pkinase 1.4e-45 CL0016