LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi05g2231	ATGGGGTGGGACCGGCGGCGGGGGATTTGGAAGACAAAGATATTTTACACAGTAAATGCGAAAGATATGGTGCCGGTGCTTTTTCAAGGGTGGGACTCGCGAGAGTTGTTGACTCTGGAAGATGCTTACTACGAAGGGCAACTGGGAGATGAGATTGCTAATATGCTCCCACAGGTCCATTTTCTGGGTGAAGGAATTGTTGGTCAAGCTGCTTTCACTGGCATGTCCAGATGGATGCTCTCGGATGCTCACACCCAAGAATGGAATTTGACAACTCAACATCATTGTGAGGACGATTCTGAATTGCGTCAACAATTCTCCTCTGGTATAAAGACAATTGCGGTGATATCTGTGAAACCATGGGGGGTCGTACAATTTGGATCCACACAGAAGATCTTGGAAAGAAGGGAATTTTTGGAACAAACACAAAGACTGCTCATTGGGACAGAAAATGTGGGTATGCTTGATACATCAACAAATACAGTTTTACCATGGGATTGTGAAAATTATGATCTGAATGGGTTGTTGGCCTCCTCAACTTCCTCTGAGAATTCGTATCATTGGAATCTCAGCTTTGATTATGGTGGGGAGAACTCCAAAGAGCTACTGAGAAATGCTTATACTGCCGCAAGTATTGATAATCCCTTCCCTTCTTGTCTTAGCGACCAATTGACAGCTGCCACAGAAGCTCAAGTTGTATCATCAGATAGGGCTAGTTTTGATATTTTTTTGAAGCGTAACTCTTCTATGAATAACTTAACTGCTAGAAACCCCTTTTTTGGCACATGGAGTGATGAAGTTTCTTCTTTGGCCTCATCAAGGCAACAATTGGTATATGAAATAAGGGATCCAGATGTTGTGGACATGTTTTCTTCGGAAGCAAATGCAACTTCTTTGTGCAGCATGAACAGCTTGCTTGGACCAAGACGGACATTTGAAGACAAATTAGGAAGTTCACTAGACTACGAGCCTTCTGCTGAATGTAGTAATGTGACAGAAGCTAATTTCCCAGAAAGTTTAAGTGAGGTACATGGTATGTCTAAGAACCTGAAGCAAGTTGAGGTGTCAGAGGACTTGTCTGAGTTGTGCTCAGTGGATGATCTTTGCCAGTGGTTTGCACCTGCTCCAGAGCATAGCATCTGCGGAACAATAAGTGCATTGGATAATTCTGCTTCTCAATCAATAGAATTAAATCCCACTTGTGTTATGGTTGAAAGTTGTGCCTTGAGAGGTATTCCAGCTGTGCATAATTCAGTCACTCCTACAGTCAACTCAGAAACACTAGAAACATCAGCCCTTGTGCATAGTTCTGAAAATAGTTTCTTGGATAGCATGGGACTTGATTTTAGCTGGGGGAATATGATTGCACCAGTGCTGAAAGCTGCTCCCAATGCTGCTTCATCTGAATGCATATCACAGCTAAATAATGGGACACCGAAGGGATTATTCTCAGGGCTTTTGAGTGGGGTAGCAAATTCGAATTCTCGTAATGACTCCAGTTTTGAGAATCAAATATCTATGACCAAAAGACGGAGGGCAGAATATTCACCTCTTATTGAACAGGCAAATGGTGTAGTTCTAAAGGACAAATGTGTGGGAGATAGCGAAGAAGGTAGTGGAGTTACATGGGCATTTGAAGTTGAAGGTCAAACAATGGCCAACAGAAATGTAACGAGGATAGATGTATTTTGGTCGCTCGTCCGGCTTCTACAAGAAACACAAAGCTCTGGAATGGATTCAGGTGACAAGTCAAGTAATGTTTTTGATGCTGGCATTCCTGCACTGGACAATTACCATATTCCCTTGGCCATGACAGATCTCGAAGTTGAAAGGAGAGAAAACCCCAGCAATTGGAATTGTACTTTCATTCTGGCTGGGAAGGTGCTCTTTTGA	1893	0.4279	MGWDRRRGIWKTKIFYTVNAKDMVPVLFQGWDSRELLTLEDAYYEGQLGDEIANMLPQVHFLGEGIVGQAAFTGMSRWMLSDAHTQEWNLTTQHHCEDDSELRQQFSSGIKTIAVISVKPWGVVQFGSTQKILERREFLEQTQRLLIGTENVGMLDTSTNTVLPWDCENYDLNGLLASSTSSENSYHWNLSFDYGGENSKELLRNAYTAASIDNPFPSCLSDQLTAATEAQVVSSDRASFDIFLKRNSSMNNLTARNPFFGTWSDEVSSLASSRQQLVYEIRDPDVVDMFSSEANATSLCSMNSLLGPRRTFEDKLGSSLDYEPSAECSNVTEANFPESLSEVHGMSKNLKQVEVSEDLSELCSVDDLCQWFAPAPEHSICGTISALDNSASQSIELNPTCVMVESCALRGIPAVHNSVTPTVNSETLETSALVHSSENSFLDSMGLDFSWGNMIAPVLKAAPNAASSECISQLNNGTPKGLFSGLLSGVANSNSRNDSSFENQISMTKRRRAEYSPLIEQANGVVLKDKCVGDSEEGSGVTWAFEVEGQTMANRNVTRIDVFWSLVRLLQETQSSGMDSGDKSSNVFDAGIPALDNYHIPLAMTDLEVERRENPSNWNCTFILAGKVLF	630

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi05g2231	630	PANTHER	TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED	553	596	IPR043561	GO:0003700\|GO:0006355
	Glsi05g2231	630	Pfam	bHLH-MYC and R2R3-MYB transcription factors N-terminal	51	144	IPR025610	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi05g2231	Glsi-ChrGlsi05	68490501	68496222	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi05g2231	36	170	Basic Helix-Loop-Helix Transcription Factor Gene Family	AT1G64625	39.568	3.22e-17	82.4