Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g2178 ATGGAGAATGAATGGAGCTGGGAGCAGAACACGCTCATCAACGAGCTAATTCAGGGGATGGAGGTAGCAAGAAAGTTGAAGGCAGATTTGAGGACACCATCTTCGACAGACACCAGGGATTTGCTGGTGCAGAGGATATTATCATCTTATGAAAAGGCTCTACTAATTTTAAGATGGAATGCGTCAAATTCCAACTCTCTTACCGTGGGGCCAACACCTGCTTTGTCTCTGGACTCTCCAATATCTTCCAACGCATGTCCTCTGAGGAAAGACGTTGATGGGGACCTAAAGAATCCTCGTGAGCTTAAACACGAGTCAAAGAAAAGAAAGATGATGCCCAGATGGATGGATCAAGTTAGAGTTAGCTCTGATACTGGCCTTGAAGGACCTCAAGATGATGGCTACAACTGGAGAAAATACGGACAGAAAGACATCCTCGGTGCCAAATATCCCAGAAGTTATTATAGGTGCACCTTTCGCAACACAAGGAGCTGCTGGGCCACGAAGCAAGTACAAAGATCAGATGAAGATCCCACTGTATTTGACATCACTTACCGAGGAAGGCATACTTGTTCCCAGGGAAATAATGATGTTCCGCCTCCTAAGTCTCCAGATAAACAGGAAAAACCACATAATCATATTCACCATGGACAGTCACTGCAACAAAGCCTAACAAAATTCAGAAATAACTTACGTGTCAATACGGATAACCTGGGAAACGAGGAGATGGCATATCCTTTTACTTTCCCTTCAAGTCCCTTTGGATGCACGACACAAGAAAACCATAGCTTACTTCCCTTGGCACTAGAGAATGATTCCTTCTTGGGCAGCCATTCACAAACAGACTTGCTATCTGCAACGTCGCTAGAATTAAACTATTTACCATCTCTGTCTTTCAAGATGAACGAATTCTATGGCATCAGTAACAAGCCGTGTTCAGAATCTGATATTACTGAGATCATTTCGGCCAAAACATCAGCCACCAATTCTCCAATACTCGATTTTAATTTCCCTATTGATCCAGTAGAAATTGATCCAAATTTCCCTTTTGACACCCCGGGATTTTTCTCATAA 1074 0.4311 MENEWSWEQNTLINELIQGMEVARKLKADLRTPSSTDTRDLLVQRILSSYEKALLILRWNASNSNSLTVGPTPALSLDSPISSNACPLRKDVDGDLKNPRELKHESKKRKMMPRWMDQVRVSSDTGLEGPQDDGYNWRKYGQKDILGAKYPRSYYRCTFRNTRSCWATKQVQRSDEDPTVFDITYRGRHTCSQGNNDVPPPKSPDKQEKPHNHIHHGQSLQQSLTKFRNNLRVNTDNLGNEEMAYPFTFPSSPFGCTTQENHSLLPLALENDSFLGSHSQTDLLSATSLELNYLPSLSFKMNEFYGISNKPCSESDITEIISAKTSATNSPILDFNFPIDPVEIDPNFPFDTPGFFS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g2178 357 MobiDBLite consensus disorder prediction 88 111 - -
Glsi05g2178 357 ProSiteProfiles WRKY domain profile. 126 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi05g2178 357 Pfam WRKY DNA -binding domain 132 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi05g2178 357 MobiDBLite consensus disorder prediction 188 216 - -
Glsi05g2178 357 MobiDBLite consensus disorder prediction 90 111 - -
Glsi05g2178 357 SUPERFAMILY WRKY DNA-binding domain 130 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi05g2178 357 Gene3D WRKY domain 117 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi05g2178 357 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 6 263 IPR044810 GO:0003700
Glsi05g2178 357 SMART WRKY_cls 131 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi05g2178 357 FunFam WRKY transcription factor 53 117 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g2178 Glsi-ChrGlsi05 68131466 68132762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g2178 6 260 WRKY Transcription Factor Family AT4G23810 45.745 2.08e-66 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi05g2178 WRKY 2.8e-26 CL0274