Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g2171 ATGCACCGGAGAAGCCGCGCAGAGAGAGATGGAAAGGGCCTAAGTTCGGAGGAGGGAGAATGGACGGAGGATGAAGGATGATACGTTTACAGTGGGAATAGACTTTATATAGTGGGGAGTGTTGGGTGGAATACGAAACTCGCGGGAACATATAAACAACCTCAGAAGACGGGTTATTCCACGGTCGTTGCAGGGCTTCTCCATTCTCCACGTAACGAACAAAACTACGAGGAAGAAGAAGCTGCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTTGACTACACCCACATCCCAACCTTACATAACAAAACCGCCTCGTAGTTTACGTTTTCCTTTGGAAATCTGTGGTGCTGCACCCAAGGGATCCTTTGAGTCTGGAATGGAACAATTCCGACATATCGGAGAGGTTCTTGGAAGTCTAAAAGCTCTCTTGGTTTTGCGTGATGAAATTCAAATCAATCAACGTCAATGCTGTTTGATTGTTGAAATCCTCAATTTGGCATTCGAAACCGTTGCAGATGAGATAAGGCAGAATCTCGTGTTGGAAGAGAGGAGTACGAAATGGAAACCCCTCGAGTATCCTCTGAGAGAATTGTGCAGGGTTTTTAAAGAAAGCGAGCATTACATCAGGCAATGCTTGGATTCCAAGGACTGGTGGGGCAAAGCAATCACCCTTAGTCATAACAACGACTGCGTCGAGTTTCACATACACAACTTGCTTTGCTACTTCCCGGCTGTGATCGAGGCGATTGAGAATGCTGGGGAGATCTCAGGACATGATCAAGATGAGAAGGACAAGAAGAAAATTATGTTAACCAGGAAGTACGACAGGGAATGGAATGACCCAAAACTTTTCCAATGGAGATTTGGGAAGCAGTATTTAGTCCCTCGTGAAATCAACAAGCAATTGGAGGATGCTTGGAGGGAGGATAGATGGAAGCTTATAGAAGCACTAAAGAAGAAGAAAGGTTGTGACAAAGTTGCTTTGACAAAGAATGAGCAGCGCCTTGCGGACATGCTAATTAAGAAACTACAAAATGGGCCGGAGAATTTAAAAAAGAAACTCTTCCCAAGTACAGTTCTATTAGGCACAAAGGACTACCAAGTGAGACGACGACTAGGACGAGGAAGCGAGTTTAAGGAAATCCAATGGTTGGGACAAAACTTTGCCTTAAGGCATGTCTATGGGGAGACGCAGACATTAGAAGCAGAGATTTCCTCTCTGTTATGTCTTTCTCATCCCAACATATTACAATACCTTTGTGGGTTCTATGATGAGGAGAAGAAAGAGTTTTTTCTAGTGATGGAGTTGATGAACAAGGATCTCTGGAGCTATATGAAGGACAACTGTGGTCCAAGGAGACAGATTTTGTTCTCTATCCCTGTTGTGGTTGATCTTATGCTTCAGATAGCAAGAGGCATGGAGTATCTCCATTCTAGAAAGATATACCATGGAGATCTTAACCCTTGCAGTATCTTGCTCAAAGCTAGGAACTCCCAAGAAGGTTATGTTCAAGCAAAAGTAGCAGGCTTTGGTTCATGGATGAAAGATGATATTACTCGAGCCTCAACATGCCAAGAGGAAATCAACTCGTCCATTTGGTACGCCCCTGAAGTTCTGACTGAGCTAGAACGATCGGGCAATGCATCTAGCTCCAGGTACTCAGAGAAGGCAGATGTCTACAGCTTCGGGATGATTTGCTTTGAGTTATTGACGGGGAAAGTGCCTTTTGAAGATAACCATCTTCAAGGAGACGGCTTCAACCGAAATATAAAAGCAGGGGAGAGGCCTCTCTTTCCATACCCTTCGCCAAAATACCTTGTCAGCTTGATCAAAAAATGCTGGCAAACTGACCCAGCCCAGCGTCCCACTTTTTCATCTATCTGTAGAATTTTACGCTACACAAAGAAATTCCTTGCCATCAATACCGAGTTTCTGGTCATCAATCCTGAACTTAACCAGCTTGAATTGCAATGCCCACCAGTGGATTATTGTGACATAGAAGCTATGTTTCTTAAGAACTTCCAAATGGAGAAGGCGTCTCATTTACCCTCCGTGTCACAAATACCACATGAAATGTTTTCTTATAAGGTTGTGGAGAAAGAGAAGACTAGTCCAAGCAATATTAAAGATAAGAGTTGCGAATCAGCAAAGGATGAAACCCCAAAGAACGAACCCTTAGTCTATAAGGAAGAAAATGATGACCACAAGAAAGTCTGCGGAGATGAGAATGCCTTCATAGTGGAACATCCACTCCCGCTGGAGACGGATACCAAGTTAAGTGGTTCTAACTTACATTTGGTTTGTTCCGAGCCTCTTGCGAAGAAATCTGTGACAATAAAACTACCAATAGAGGAGAAAGCCAAGAAAGACCGAGGGACGCTAAAATTGCAACCAACAAACTCAGCAAGCCGCGGTTTAAGGACGAGTAAAGGGAATCAGTTGGGATTGGCATCAAGCCCTGTAAGCCCAAGTAGAGGAAGGTCTTCCCATGTCTTAGATTCCAAGATCAATAAAGGAAGTCAATCACGGTCTGTGTCGAGCCCTACAAGTTCAGTCAGAAGAAAAAGAACAGGACATGTCTCAGATTCTAAGAGCAGTAGTAGCCTAAAGATGAAAACAGGGAACCAATCACCATCGACAAGATATGGCCGTGTCTCAGATTCTAAGAGCAGAAAAGGTAATCAGTCACCGTTGATAAGATATGGCCATGTCTCAGATTCTAAGATGAATAAAGGGAGTCAGTCGCCATTGGGTTATGGCACAGGAAGATTAAGGCGTTCTAGCACGGACACCAATTCGAAGATGAGAAGTGGGAACATGTCACCATATGCATTGAGCCCTTTCAGCACATGCACAAGAAGATGCGGTCGTGTCTCGGATTTTGAAGGCGTTTTAAAGATGAACAGAGGAAGACTCTCGCCATTGACATTGAGTCCTTTAAGCCCATATGTAAGAACATATGGCCATATTTCTAACTCTCAGAGAAGTTCCAAGCCGAAAAGAGCCAGCTTGTCTCCATTAACATTGAGTCCTTTGAGCCCATATGTGAGAAGAACAAGTGGCCATGTCTCCGATTAA 3081 0.4382 MHRRSRAERDGKGLSSEEGEWTEDEGXYVYSGNRLYIVGSVGWNTKLAGTYKQPQKTGYSTVVAGLLHSPRNEQNYEEEEAASSSSSSSSSLTTPTSQPYITKPPRSLRFPLEICGAAPKGSFESGMEQFRHIGEVLGSLKALLVLRDEIQINQRQCCLIVEILNLAFETVADEIRQNLVLEERSTKWKPLEYPLRELCRVFKESEHYIRQCLDSKDWWGKAITLSHNNDCVEFHIHNLLCYFPAVIEAIENAGEISGHDQDEKDKKKIMLTRKYDREWNDPKLFQWRFGKQYLVPREINKQLEDAWREDRWKLIEALKKKKGCDKVALTKNEQRLADMLIKKLQNGPENLKKKLFPSTVLLGTKDYQVRRRLGRGSEFKEIQWLGQNFALRHVYGETQTLEAEISSLLCLSHPNILQYLCGFYDEEKKEFFLVMELMNKDLWSYMKDNCGPRRQILFSIPVVVDLMLQIARGMEYLHSRKIYHGDLNPCSILLKARNSQEGYVQAKVAGFGSWMKDDITRASTCQEEINSSIWYAPEVLTELERSGNASSSRYSEKADVYSFGMICFELLTGKVPFEDNHLQGDGFNRNIKAGERPLFPYPSPKYLVSLIKKCWQTDPAQRPTFSSICRILRYTKKFLAINTEFLVINPELNQLELQCPPVDYCDIEAMFLKNFQMEKASHLPSVSQIPHEMFSYKVVEKEKTSPSNIKDKSCESAKDETPKNEPLVYKEENDDHKKVCGDENAFIVEHPLPLETDTKLSGSNLHLVCSEPLAKKSVTIKLPIEEKAKKDRGTLKLQPTNSASRGLRTSKGNQLGLASSPVSPSRGRSSHVLDSKINKGSQSRSVSSPTSSVRRKRTGHVSDSKSSSSLKMKTGNQSPSTRYGRVSDSKSRKGNQSPLIRYGHVSDSKMNKGSQSPLGYGTGRLRRSSTDTNSKMRSGNMSPYALSPFSTCTRRCGRVSDFEGVLKMNRGRLSPLTLSPLSPYVRTYGHISNSQRSSKPKRASLSPLTLSPLSPYVRRTSGHVSD 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g2171 1026 MobiDBLite consensus disorder prediction 1 20 - -
Glsi05g2171 1026 MobiDBLite consensus disorder prediction 68 105 - -
Glsi05g2171 1026 SUPERFAMILY Protein kinase-like (PK-like) 362 650 IPR011009 -
Glsi05g2171 1026 MobiDBLite consensus disorder prediction 791 942 - -
Glsi05g2171 1026 MobiDBLite consensus disorder prediction 795 855 - -
Glsi05g2171 1026 MobiDBLite consensus disorder prediction 908 942 - -
Glsi05g2171 1026 Gene3D Transferase(Phosphotransferase) domain 1 346 647 - -
Glsi05g2171 1026 MobiDBLite consensus disorder prediction 79 103 - -
Glsi05g2171 1026 Pfam Protein of unknown function (DUF1221) 147 363 IPR010632 -
Glsi05g2171 1026 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 138 633 - -
Glsi05g2171 1026 MobiDBLite consensus disorder prediction 990 1026 - -
Glsi05g2171 1026 Pfam Protein tyrosine and serine/threonine kinase 397 631 IPR001245 GO:0004672|GO:0006468
Glsi05g2171 1026 MobiDBLite consensus disorder prediction 863 896 - -
Glsi05g2171 1026 FunFam Kinase family protein 364 645 - -
Glsi05g2171 1026 ProSiteProfiles Protein kinase domain profile. 367 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g2171 Glsi-ChrGlsi05 68073758 68079748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g2171 399 632 MAP Kinase Kinase Kinase AT1G62400 31.915 1.08e-25 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Glsi05g2171 PK_Tyr_Ser-Thr 3e-35 CL0016