Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g2163 ATGAACGACGCAGATGTCTCCAAGCAAATCCAGCAGATGGTGAGGTTTATCCGCCAGGAAGCCGAGGAAAAAGCCAACGAGATCGCTGTATCTGCTGAAGAAGAATTTAACATCGAGAAGTTGCAGTTGGTTGAAGCCGAGAGAAAGAAGATCAGGCAAGAATACGAGCGCAAAGAGAAGCAAGTTGACGTTCGCAAGAAGATTGAGTACTCTATGCAGCTGAATGCTTCTCGCATAAAAGTTCTTCAAGCTCAAGATGGTGTGGTTAATTCCATGAAAGATGCAGCGTCAGAGGAACTTTTGAATGTGAGTCATCAACACCATGTGTACAGACCCCTTCTGAAAGATCTTATCGTTCAGAGTTTGCTGAGACTGAAAGAGCCTTCTGTCCTATTGCGATGTCGGAAAGATGACCTGCATTTGGTGGAGCATGTCCTGGATTCAGCTGCACAGGAGTATGCTGATAAAGCAAAGGTTCATCCACCGGAGATCATTGTTGACAAGCAAGTCTATCTTCCACCTGCTCCCAGCCATCATAATACCCATGAGCTCTCCTGCTCTGGAGGGGTAGTGTTGGCTTCTCGAGATGGGAAGATTGTGTGTGAAAATACTCTTGATGCTCGATTGGATGTAGCGTTTCGTAACAAGCTTCCAGAGATTCGCAAGCAGCTCTTTGGACAAGTTGTTGCTTGA 693 0.4603 MNDADVSKQIQQMVRFIRQEAEEKANEIAVSAEEEFNIEKLQLVEAERKKIRQEYERKEKQVDVRKKIEYSMQLNASRIKVLQAQDGVVNSMKDAASEELLNVSHQHHVYRPLLKDLIVQSLLRLKEPSVLLRCRKDDLHLVEHVLDSAAQEYADKAKVHPPEIIVDKQVYLPPAPSHHNTHELSCSGGVVLASRDGKIVCENTLDARLDVAFRNKLPEIRKQLFGQVVA 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g2163 230 Hamap V-type proton ATPase subunit E [atpE]. 8 226 IPR002842 GO:0033178|GO:0046961|GO:1902600
Glsi05g2163 230 SUPERFAMILY V-type ATPase subunit E-like 88 226 - -
Glsi05g2163 230 Pfam ATP synthase (E/31 kDa) subunit 16 225 IPR002842 GO:0033178|GO:0046961|GO:1902600
Glsi05g2163 230 Coils Coil 29 61 - -
Glsi05g2163 230 Gene3D - 92 228 IPR038495 -
Glsi05g2163 230 Gene3D - 1 62 - -
Glsi05g2163 230 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 227 IPR002842 GO:0033178|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g2163 Glsi-ChrGlsi05 68033114 68036071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g2163 1 230 Primary Pumps ATPases(2) AT4G11150 78.261 1.13e-130 366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g2163 05 68033114 68036071 Glsi05g2163 05 68033114 68036071 ECH