Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g2130 ATGATGGATAATAAGCTGGCATGCTTGATGGACTGGGATTTGCAGGCTATTGTGGGAGGCTGCACCAATGAAGCGCCAGCGGCCATCATACACAACCCACATCCTAATTTTTCTTATTTCTGTTATGAACAAGATCATGATCTTCTCAGAAGTTTTCCTGCTTTCTCAGAAACCACATCGGTCCTTGATGAATTGGAAGAGCCTCGCAAACCTTCCTACCCCGTTTTGCACCCTCTTTCTACACAGACCACCATCCCGAGTTCCGTACCTATTCCTAACGAAGTCAAGGCATCAGATAAAGTACTAGACTCGAAAGATCTCGCAGCATCTAGATGTAAAAGAAGCAAGAAAAACCAACACAAGAGGGTGGTGAAGCAGGTGACGGCAGATGGTCTGTGCGACGCAGGGGCATGGCGTAAATATGGGCAGAAGCCAATTAAGGGATCACCTTACCCTCGAAGCTACTATAGGTGCAGCAGCTCCAAAGGATGTGCGGCTAGGAAACAAGTCGAACGGAGCCATTTGGATCCGGAAGTGTTCATCGTTACCTATACTGCAGAGCACAGTCACCATCACTCAACTCGCCCTTGGAGGACCAGGAAAAACAAGGACTCAATTGCACCTGAAACTACTCAACACACTTGTTCTCCAAGGACACCTTTGGTGGAGTCCATTGTAGATGAACTTGTGCCAAGTGGGCAAAGCGAGGGCTTGAACAAAGGGGAAGATCTGCTTGTATTGTCTGAAGATGCGCCTGTCACGGCTAATATACTAGGGAGTGATGATTGGTTTCCAAGCATAGAGGAACTCAACGAACTTAGCCAAGAATTTGCACTATTCATGGATACTTTTGCTGAGACATAG 864 0.4699 MMDNKLACLMDWDLQAIVGGCTNEAPAAIIHNPHPNFSYFCYEQDHDLLRSFPAFSETTSVLDELEEPRKPSYPVLHPLSTQTTIPSSVPIPNEVKASDKVLDSKDLAASRCKRSKKNQHKRVVKQVTADGLCDAGAWRKYGQKPIKGSPYPRSYYRCSSSKGCAARKQVERSHLDPEVFIVTYTAEHSHHHSTRPWRTRKNKDSIAPETTQHTCSPRTPLVESIVDELVPSGQSEGLNKGEDLLVLSEDAPVTANILGSDDWFPSIEELNELSQEFALFMDTFAET 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g2130 287 ProSiteProfiles WRKY domain profile. 127 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi05g2130 287 SUPERFAMILY WRKY DNA-binding domain 127 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi05g2130 287 SMART WRKY_cls 132 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi05g2130 287 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 64 220 IPR044810 GO:0003700
Glsi05g2130 287 Gene3D WRKY domain 116 186 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi05g2130 287 MobiDBLite consensus disorder prediction 191 216 - -
Glsi05g2130 287 Pfam WRKY DNA -binding domain 134 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi05g2130 287 FunFam WRKY transcription factor 22 116 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g2130 Glsi-ChrGlsi05 67796650 67797610 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g2130 4 232 WRKY Transcription Factor Family AT4G23550 42.857 1.85e-42 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi05g2130 WRKY 4.1e-24 CL0274