Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g2119 ATGATCATTCCTGAGAAGAACCGTCGAGAGATCTGCAAATACCTCTTCCGAGAGGGAGTTTGCTATGCAAAGAAGGACTTCAATCTGGCAAAACACCCCGACATTGACGTGCCGAATCTACAGGTGATTAAGCTGATGCAGAGCTTCAAGTCCAGGGAGTACGTGCGTGAGACATTTGCTTGGATGCACTACTACTGGTACCTCACTAATGATGGCATTGAATTCCTTAGAACTTACCTTAATCTTCCTTCCGAAATCGTGCCTGCTACTTTGAAGAAACAAGCAAAGCCCGCTGGTAGACCATTCGGTGGCCCACCTGGTGATCGCCCGAGGGGTCCACCTCGCTTTGATGGAGAACGTAGATTTGGTGACCGTGATGGATACCGTGGAGGTCCCCGAGGACCTGGTGGTGACTTTGGAGACAAGGGTGGAGCTCCTGCTGACTACAGGCCTTCTTTTGGGGGTCCTGGGGGAAGGCCTGGCTTCGGTCGTGGTTCTGGTGGTTATGGAGCGCCAACTAGTTCAAATCTTTCTTGA 537 0.5121 MIIPEKNRREICKYLFREGVCYAKKDFNLAKHPDIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGSGGYGAPTSSNLS 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g2119 178 MobiDBLite consensus disorder prediction 112 128 - -
Glsi05g2119 178 MobiDBLite consensus disorder prediction 91 178 - -
Glsi05g2119 178 Gene3D - 1 104 IPR036388 -
Glsi05g2119 178 FunFam 40S ribosomal protein S10 1 104 - -
Glsi05g2119 178 Pfam Plectin/S10 domain 3 94 IPR005326 -
Glsi05g2119 178 PANTHER 40S RIBOSOMAL PROTEIN S10 1 172 IPR037447 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g2119 Glsi-ChrGlsi05 67739062 67740664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g2119 1 177 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 75.843 3.58e-77 226