Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g2099 ATGGCAGGATGTTCAACTTTCACAAATGGCTCTTCCTTAGATTTCGTTGAACCTGTTGGTGCATATCAGGGTGATGGTTGTTGCCTTGACTTTGATCGTGCAGTAAAAAATCTTGTTGATGATGTTAGTGATTATAAAGTTAAACAAAAGTGCTTGTTTTATCAACTTCTTTCGGTTCATCTAAAGGAGAATAATTCTAGAGGTATTATCCGTCCTGTGCCTGTAATGCTTGGTGATGGTCAATCGCTGGATTTATACAATCTGTTCTTCTTTGTGAAGGAAAGAGGTGGGTATGCTTTAGTGACGAAGAAAGGATTGTGGGGTTCTGTGGCAAAGGAATTGGGTTTGAACCTTGAAGTTTTGGCTTCGGTTAAATTAGTTTATGGTAAGTATTTGAATGAGTTTGAAGGATGGCTCAGGAAGACTTATGGAGGAAAGAATTTCAGAAATGGGAATCATGGGTGTAATTTTGGCATTAAGTCATTGCCGTTAGAGATAGAGAGAGAGTTTAGAGGCCTATTATGTCCAAACCTAAATTGGAAAGATGAAGGACCTGTCCAGTTGGAATCAAATAAAATCAGAAAGTACATTGATGTGGTTAATCACAACAGTGAAATGAATTTATTGGACAACAAAAATCAACACGCAGTACACGAGGATGTCCAAAATATCCATGGTGGTGATGTCTTCAAATTATGTAATGGCCTTGAGGATGATCTTGCTACCTTGAACTCAGAAGTTACTGAGAAGGAATTCAATTCTCGTAAGCGCAAACGAGAAGCATCATCAGCAATGCTGAAGTGGATCAGACAAATTGCAAAGCATCCTCTTGATCCTTCAATTGAACCAATACCAGAACCATCCGAGTGGAAGGAGTATAAAGGCAAAGACTTTTGGTTCCAGATACTGAGGGCACGAGAGGCATTTCTGAGGTGTTGTGTTGAACCAAACAGTGGAAAATCTTCCTCGCAGAAGCTAAAGATGCATCCTGCTATGTATGAGGATCATGTTGCTCTTAGTCACCGGTCTACAGTGAAACTGAGATGTACTGAAAGGTTTACTACCTCAGTTAAATCTCGGTTATGCTCTTGTTGCAATTCTTGTTCAGCCATTGAAGATAAGTTGACAAGTTCAGTCAATACAGAGGCAGAAAATGCTTCTCTGGAGGAAAAAACTGCAGCGGATGATTTGTTGACTGCAAAGGTAATGGCTAACCCATCTGGGGATGATACTCCTGAAAAGCATGTTTCTATAGGTCCTCGTTTTCAAGCTGAAGTCCCAAAATGGACTGGAGTAGTTTCTGAAAGCGTCTCTAAATGGTTAGGCACACAAGTATGGCCTCTGAAGTATAGTGAGACAAAACCTGCTACTGCAACAGATCTTACTGGGAAAGGAAGACAAGAGAAGTGTAGCTGTCAAGTTCAAGGTTCTGTTGAATGTGTTAGATTTCACATTGCTGAGAAGAGGATGAAATTGAAGCTTGAATTGGGTTCAGCATTTTACCAATGGGGATTTGATTGTATGGGCGAGGAAGTTTCACTTCAATGGACGACTGAAGAAGAAAAGAAGTTCAAGAATATAATGATGTCAAATCTTCCCTCCCAAACTAGGTGTTTACTAAACAACCCGTCCAAGTACTTTCCAAAGAAGACAAGGAGAAACTTGGTAAGCTATTACTTCAATGTATTTCTTATTCAACGCAGAGTTTATCAGAATCGTGTGACTCCAGATAGTGTTGATAGTGATGATGATGAACTAGAATTTGGATCTTTAAGTGATGGTTTTGGGATGGAAACTGTCAAGGGGCCAGGCAATAAATTCCCGGAGTGTTCTCAGAACAACCAGTGCACTGATTTGGAGTAA 1863 0.3999 MAGCSTFTNGSSLDFVEPVGAYQGDGCCLDFDRAVKNLVDDVSDYKVKQKCLFYQLLSVHLKENNSRGIIRPVPVMLGDGQSLDLYNLFFFVKERGGYALVTKKGLWGSVAKELGLNLEVLASVKLVYGKYLNEFEGWLRKTYGGKNFRNGNHGCNFGIKSLPLEIEREFRGLLCPNLNWKDEGPVQLESNKIRKYIDVVNHNSEMNLLDNKNQHAVHEDVQNIHGGDVFKLCNGLEDDLATLNSEVTEKEFNSRKRKREASSAMLKWIRQIAKHPLDPSIEPIPEPSEWKEYKGKDFWFQILRAREAFLRCCVEPNSGKSSSQKLKMHPAMYEDHVALSHRSTVKLRCTERFTTSVKSRLCSCCNSCSAIEDKLTSSVNTEAENASLEEKTAADDLLTAKVMANPSGDDTPEKHVSIGPRFQAEVPKWTGVVSESVSKWLGTQVWPLKYSETKPATATDLTGKGRQEKCSCQVQGSVECVRFHIAEKRMKLKLELGSAFYQWGFDCMGEEVSLQWTTEEEKKFKNIMMSNLPSQTRCLLNNPSKYFPKKTRRNLVSYYFNVFLIQRRVYQNRVTPDSVDSDDDELEFGSLSDGFGMETVKGPGNKFPECSQNNQCTDLE 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g2099 620 SMART bright_3 48 141 IPR001606 GO:0003677
Glsi05g2099 620 SUPERFAMILY ARID-like 48 141 IPR036431 GO:0003677
Glsi05g2099 620 Gene3D - 30 152 IPR036431 GO:0003677
Glsi05g2099 620 ProSiteProfiles ARID domain profile. 47 140 IPR001606 GO:0003677
Glsi05g2099 620 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 43 615 - -
Glsi05g2099 620 Pfam ARID/BRIGHT DNA binding domain 52 136 IPR001606 GO:0003677
Glsi05g2099 620 SMART ARID_2 44 136 - -
Glsi05g2099 620 CDD ARID 53 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g2099 Glsi-ChrGlsi05 67605246 67608614 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Glsi05g2099 ARID 1.1e-11 CL0123