Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g2092 ATGGATGCATCCACGGCTTTAATGGTCCTGTCAGCCGTAGCTGCTTATTTAATATGGTTCAAATTCATCTCGCGGTCCCTGAATGGTCCACGTGTCTGGCCTCTGTTGGGGAGCCTTCCAGGACTGATCCAAAACTCTAATCGCATGCATGATTGGATTGCGGACAATCTCCGCGCGTGCGGCGGCACTTACCAGACCTGCATCTGTGCCATTCCCTTCCTCGCTAGGAAACAAGGCCTCGTCACTGTCACGTGCGACCCCAAGAACTTGGAGCACATTCTCAAACTCCGCTTCGATAATTATCCCAAGGGACCGACTTGGCAAGCTGTGTTTCATGATTTACTCGGCGATGGCATCTTCAATTCCGACGGCGACACCTGGTTGTTCCAGCGCAAGACCGCCGCTTTGGAATTCACCACACGGACTCTGCGCCAGGCCATGGCGCGCTGGGTTAGCCGAGCCATCAAACTCAGATTTTGCCCCATCCTCGCCATAGCACAGCAGGACCAAAAGCCGGTTGATCTTCAAGACCTTTTGCTTCGCCTCACTTTCGACAACATATGCGGCTTGGCTTTCGGGAAAGATCCGCAAACGCTCTCCGAAGGGCTTCCGGAGAACGGCTTCGCATTGGCTTTCGACAGAGCCACCGAAGCCTCCCTGAAGCGTTTTATTTTGCCAGAGATGGTGTGGAAATTCAAGAAGTGGCTGGGGCTGGGAATGGAAGTGAGCTTGAGCCGAAGCCTTGAACACATCGATAAGTACTTGTCCAACATCATTAACACGCGCAAGCTTGAGTTGCTAAACAAGCAACAGGATGGGAGTGGGGTCCCCCACGATGACCTGCTCTCCAGGTTCATGAAGAAAAAGGAGTCTTACTCGGAAGCGTTCTTGCAACACGTGGCGCTCAACTTCATCCTAGCTGGACGTGACACGTCATCCGTTGCACTGAGCTGGTTCTTCTGGTTGTGCATCCAAAACCCAGAAGTGGAAGAGAAAATCCTGATGGAACTTTGCACGGTTCTGACGGAGACACGCGGAAGTGACATCTCGAAGTGGGTGGAAGAGCCGCTGGTGTTTGAGGAGGTTGACCGACTGATATACCTGAAAGCGGCATTGTCGGAGACGCTGAGACTTTACCCGTCGGTGCCAGAGGACTCAAAGCACGTGATCAACGACGACGTTTTGCCAAGCGGAACCTTCGTTCCGGCGGGTTCAGCTGTGACATACTCCATATATTCAATTGGGAGGATGAAATACATATGGGGAGAGGATTGCCTAGAGTTTAAGCCAGAGAGGTGGTTGTCGGCGGATGGTAACAAGATCGAGCTACAGGACTCGTATAAGTTCGTTTCATTCAATGCGGGTCCAAGAATTTGCTTGGGCAAAGATTTAGCCTACCTGCAAATGAAGTCCATTGCGGCCGCGGTTTTGTTGCGCCACCGCCTCACGGTGGCTCCAGGGCACCGTGTGGAGCAGAAGATGTCACTCACGTTATTCATGAAGTACGGGCTGAAGGTGAAGGTGCAGCCGAGGGAGCTCAGGTCTATATTAGAAAAAATAGGCAAGGGTGCCTCCTGCGGTAAAGAAGCTGCGGGTAATGGCATATGCCTGCCCGCCCTCGCTTAA 1626 0.5258 MDASTALMVLSAVAAYLIWFKFISRSLNGPRVWPLLGSLPGLIQNSNRMHDWIADNLRACGGTYQTCICAIPFLARKQGLVTVTCDPKNLEHILKLRFDNYPKGPTWQAVFHDLLGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKLRFCPILAIAQQDQKPVDLQDLLLRLTFDNICGLAFGKDPQTLSEGLPENGFALAFDRATEASLKRFILPEMVWKFKKWLGLGMEVSLSRSLEHIDKYLSNIINTRKLELLNKQQDGSGVPHDDLLSRFMKKKESYSEAFLQHVALNFILAGRDTSSVALSWFFWLCIQNPEVEEKILMELCTVLTETRGSDISKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPEDSKHVINDDVLPSGTFVPAGSAVTYSIYSIGRMKYIWGEDCLEFKPERWLSADGNKIELQDSYKFVSFNAGPRICLGKDLAYLQMKSIAAAVLLRHRLTVAPGHRVEQKMSLTLFMKYGLKVKVQPRELRSILEKIGKGASCGKEAAGNGICLPALA 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g2092 541 PANTHER CYTOCHROME P450 22 506 - -
Glsi05g2092 541 Pfam Cytochrome P450 29 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g2092 541 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Glsi05g2092 541 Gene3D Cytochrome P450 24 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g2092 541 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g2092 541 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g2092 541 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g2092 541 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g2092 541 SUPERFAMILY Cytochrome P450 21 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g2092 541 FunFam Cytochrome P450 21 514 - -
Glsi05g2092 541 CDD CYP86A 67 504 - -
Glsi05g2092 541 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g2092 541 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g2092 541 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g2092 541 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g2092 541 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g2092 Glsi-ChrGlsi05 67547691 67549316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g2092 1 520 Cytochrome P450 AT4G00360 76.200 0.0 841
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g2092 05 67547691 67549316 Glsi05g2092 05 67547691 67549316 ECH