Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g2090 ATGCTGTCATGGTGGGGAAAGTCTTCATCCAAAGAGGTGAAGAGGAAAGCAAACAAAGAAAGTATTATTGATACAATACAGCGGAAGCTGAAAAGCGCTTCTGAAGACAATAAATCAGGAAGTTCTAGGAGACATCGGAGTGATACTGTCTTAGAGAAGGGATTCAGATCCCATGGAATTTCAAGATCACCATCACCTTCTACACATGTGTCCCGATGTCAAAGTTTTGCAGAAAGGCCTCATGCCCAACCACTCCCATTGCCAGGATTGCAACGGTCTACCATCAGTCGTACAAACTCTTCAATTAGTGTAGCATCAAAACCAGAAAACACTAAAGGCTCTAAACCATCTCTGTATTTTCCCCTCCCAAAACCTGGATGTGCTTCTAACCAGGGAGAACCTACAGATGCTGAGGGAGATATAGCCACAGCATCTGTTTCTAGTGACAGCTCTATTGATAGTGATGATCCATCTGATTTACGTCTCCTTAGTCCTCTGGCATCTGACTGTGAAATTGGAAACAGAACCAACATTAACAATTCCTTCAGTGTGGGGTACCAGGATCAATCATCTGTTCCTATCCCAAAGAACTCAGGCACTTTGTCAAAACCATCTCCTCAACTGTGCAATAATCAGTATTTTTCTACCTCGCCTCAAGGGGGACCTCTTCATCTGAAGAATCTGCAAATAGCTTGCCCAGGTGGTCTATGCAGTGCTCCAGATAGTTCAATGTCAAGTCCTTCTAGAAGTCCATTGAGAGCACTTGGTCCTGAGCAAGTTTTAAATGCTGTATTCTGGACAAGAAAGCCTTATTCTGATGTGGCTTCTGGACACTGCTCCAGTCCAGGCTCAGGTCATAATTCTGGGCATAACTCTGTCGGTGGAGATCTGTCAGGACAGATATTTTGGCCACAAAGCAGGTGCAGCACTGAGTGTTCTCCAATACCTAGTCCTAGAATGACAAGCCCGGGTCCCAGCTCAAGGATACACAGTGGTGCTGTTACCCCTCTACATCCACGAGCAAGAGGCATTGCAACAGAGTCACCTATAATACGTCCTGATGATGGGAAACAACAAACTCATCGATTACCTCTTCCTCCAATAACAATCACTAGTTCTTGTCCTTTTTCTCCAAACTATTCTGTGGCCACAACTCCTTCAGCCCCACGAAGTCCTGGCGGAGCAGAAAATCCAACAAGCCCTGGTTCATGCTGGAAAAAGGGGCAGTTGCTTGGAAGGGGAACATTTGGGCATGTATATCTCGGTTTTAACAGTGAAAGTGGTGACATGTGTGCAATGAAGGAGGTAACCCTCTTTTCAGATGATCCAAAATCAAGGGAATGTGCACAGCAACTTGGCCAAGAAATTACACTGCTAAGTCGCTTGCGGCATCAAAATATAGTTCAGTACTATGGATCTGAGACGGTAGATGACAAACTTTATATATACTTGGAGTATGTCTCTGGTGGGTCAATCTATAAACTGCTTCAAGAATATGGCCAGTTTGGTGAAATTGCCATTCGTAATTATACACGGCAAATTCTGTCAGGTCTTGCATATTTACATGCTAAGAATACTGTTCATAGGGACATTAAAGGAGCAAACATATTGGTGGATCCTAATGGGCGGGTAAAATTGGCTGATTTTGGGATGGCAAAGCATATAAATGGGCAGTCTTGTCCATTATCTTTTAAAGGAAGTCCTTACTGGATGGCACCTGAGGTTATAAAGAATTCAAATGGTTGTAATCTTGCTGTTGATATATGGAGCCTTGGCTGCACTGTTTTGGAGATGGCTACGACAAAACCTCCTTGGAGCCAATATGAAGGGGTTGCTGCAATGTTCAAGATTGGGAACAGCAAAGAACTTCCTACAATTCCAGATCATCTGTCAGAAGATGGAAAAGAATTTGTCAGGCTTTGTTTGCAAAGGAACCCACTACATCGTCCCTCGGCTGCTCAACTTCTGGGGCATCCATTTATAAAAAACGCTACACTGGAAAAACCCATTCTTACTGCTGATCCTTCAGAAGCACCACCTGCTGTTACAAATGCAGTGAGATCTCTGGCCATTGGAACTGCAAGACATAAATCATGCATAGACTCGGAAGGGGCTGGTATCTATCCGTCTAGAAGCTTGAAAACTTGTTCAAAATCAAGTGATACCCATACACCAAGAAACATCTCATACGCTGTTTCCCCCACCGGGAGCCCACTTTTACCTTCCAGATCATTGCATGCAAGTGGAATAATGTCGTCCTCACCAATATCTAGTCCTCACACTGCATCTGGTTCATCCACCCCACTGAGTGGCGGTACTGGTGCAATCCCATTCCAGCAAGCAAAGCAGCTAACCTTCTCATACGAAGTGGTTGGTATGATCCAAAGTTGTCAAAACAGTTACTATTCAAATGGCAGCACTGCCTCTTATGAGCCAAAGCATGACGCGTTTTGGGGGGTTCCACAAACCACTCATGCTTACAAGAATATAATTTTATCTGATAACGATGCTCTAGCAAACCAGATTAGGAGGCCTGTCCAGGGAGACCCAAGAGAATTTTATGATGATAAGTCATATTTGGCTGATTGCGTCTCACAGCAGCTGTTAAGGGATCGTGTAAGGCTTAATTCATCCGTAGATATTAAGCCCAGTACCGCAATGCTTAGTCGCATAAATGGCTTATAA 2685 0.4402 MLSWWGKSSSKEVKRKANKESIIDTIQRKLKSASEDNKSGSSRRHRSDTVLEKGFRSHGISRSPSPSTHVSRCQSFAERPHAQPLPLPGLQRSTISRTNSSISVASKPENTKGSKPSLYFPLPKPGCASNQGEPTDAEGDIATASVSSDSSIDSDDPSDLRLLSPLASDCEIGNRTNINNSFSVGYQDQSSVPIPKNSGTLSKPSPQLCNNQYFSTSPQGGPLHLKNLQIACPGGLCSAPDSSMSSPSRSPLRALGPEQVLNAVFWTRKPYSDVASGHCSSPGSGHNSGHNSVGGDLSGQIFWPQSRCSTECSPIPSPRMTSPGPSSRIHSGAVTPLHPRARGIATESPIIRPDDGKQQTHRLPLPPITITSSCPFSPNYSVATTPSAPRSPGGAENPTSPGSCWKKGQLLGRGTFGHVYLGFNSESGDMCAMKEVTLFSDDPKSRECAQQLGQEITLLSRLRHQNIVQYYGSETVDDKLYIYLEYVSGGSIYKLLQEYGQFGEIAIRNYTRQILSGLAYLHAKNTVHRDIKGANILVDPNGRVKLADFGMAKHINGQSCPLSFKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDHLSEDGKEFVRLCLQRNPLHRPSAAQLLGHPFIKNATLEKPILTADPSEAPPAVTNAVRSLAIGTARHKSCIDSEGAGIYPSRSLKTCSKSSDTHTPRNISYAVSPTGSPLLPSRSLHASGIMSSSPISSPHTASGSSTPLSGGTGAIPFQQAKQLTFSYEVVGMIQSCQNSYYSNGSTASYEPKHDAFWGVPQTTHAYKNIILSDNDALANQIRRPVQGDPREFYDDKSYLADCVSQQLLRDRVRLNSSVDIKPSTAMLSRINGL 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g2090 894 FunFam Mitogen-activated protein kinase kinase kinase 403 685 - -
Glsi05g2090 894 CDD STKc_MEKK1_plant 405 661 - -
Glsi05g2090 894 Coils Coil 16 36 - -
Glsi05g2090 894 SUPERFAMILY Protein kinase-like (PK-like) 404 729 IPR011009 -
Glsi05g2090 894 MobiDBLite consensus disorder prediction 716 735 - -
Glsi05g2090 894 Gene3D Transferase(Phosphotransferase) domain 1 404 684 - -
Glsi05g2090 894 MobiDBLite consensus disorder prediction 9 55 - -
Glsi05g2090 894 SMART serkin_6 405 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g2090 894 MobiDBLite consensus disorder prediction 89 113 - -
Glsi05g2090 894 Pfam Protein kinase domain 406 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g2090 894 MobiDBLite consensus disorder prediction 60 74 - -
Glsi05g2090 894 MobiDBLite consensus disorder prediction 748 774 - -
Glsi05g2090 894 MobiDBLite consensus disorder prediction 381 404 - -
Glsi05g2090 894 ProSitePatterns Protein kinases ATP-binding region signature. 411 434 IPR017441 GO:0005524
Glsi05g2090 894 ProSiteProfiles Protein kinase domain profile. 405 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g2090 894 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 61 679 - -
Glsi05g2090 894 MobiDBLite consensus disorder prediction 1 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g2090 Glsi-ChrGlsi05 67535700 67542939 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g2090 2 883 MAP Kinase Kinase Kinase AT1G63700 61.272 0.0 943
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Glsi05g2090 Pkinase 1.8e-70 CL0016