Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g2087 ATGGTCGAGACAGGTTGCAGCTGGCGACTTTATAGAATCTTCAATTTTCGTGAAGCTCAAGCCAAAAGAAGATTGGTTTCCAATAGCAACAGGAGGCATTCGAACATACATGCCATTGGCAAGAGACTAAGAGTTGTTCCATTTTATTTCTCAAAAAGATTGGGAAATGGCAACTCGAGAAGTAGACCGGATGTGCTTGCCGTAGTTGATGAAAAGCACCCTCACATTGATGAAAGTTCTAAGGGAGCAAGAGATTATGGTTGCAAAAGTATCAGCTGCGTGAAGGTAGCAGATCGGGGAAATGAAGCAACAAAGATGGTTGTGGATCAGAAATTTATCAATGGGAAATATCTATGCAAAGATGGGGCAGGCTCTCAGTCTAATCAATTCTTTGATGCTTTACAGATTTTATACTCAAACAAGGAACTTTTCCTAAAACTTCTACAAGACCCAAACTCTCTGTTAGCAAAACAGATTTACGACCTACAGAATTCTCAATATCAGGAAAGGCAAAAAAGAGTGACCAGATCTGCCTATGAATCCGGATGGAATAACTCTCGAAAAAGTAATGCAAGACAATGTGGCAATCCGAGTAAGTCCTCCGATAGATATATTTTAAGTTGTGATCCGCAGTCTTCAGACGGAATAGACACTGGCCGTCAGTGTCCTCTGCATTCTCATAATAGATTCAGTTATAATGCCCAAACTGCGAAGCCCTCACATTTTCCCTTTTCTCGTATGAAGAGAAAGTTAAGGCATGCCATGGGAGTAAGAAAAAAAGAACAACAGTGGGGGACAATTGATGGTGTGTCGCATAAATTTCCCTGTGGTTGCCAAGGATTGGAAGATGGTGATAAAGTACTTGGAATGGAGGAGAGTGTTGGAAGAAATTCACCAAGTGGTGATCATTCTCGTTTTGCAAAAGGGGGGAAGTTATCACTTGATTTGAAGAAGAGAGACAAGATGATAAAGATAAAAGATTGTACACTATGTATTGGACAGGAAGCTGTTTCAGTTGGTGAAAGTTGTGGTAGGAACATGAATCGAACTTCAGTCTGCCCTTCTGAGCAAAATATACAGAAGATGCATGTTGAAGCTAGGAAAAACCTATCTGAGATGTTAAATTGCAGACATGAGGAGCGTAAACAGTGGACACACACTCAAGGTAGAACATTCCCTCTTCCTCGATTTGAGTCCGTGCCAGGAAGTTTCGGGAGGGACCGGCGGCACCCTTCTGTTACAGAAGGGATGGGATGTTTTCCTAACAAACATCATATGGTCCCCGGAAACAAGTTGTGGCTTCAGAAAGAGGAAAATAGTTGCTTTGGTTCTTTGGGCCAGAACATTAATGAGCCACCGGGGGCTATTGTTGGTTCAACCATCAGGAAGAGTCCTCCTGACAATAATCTTCATGAAGATTATAAGATCCCTAGAGGGTCTGAGAAGCTCATAAAATCTAGTTATGATTTGCATACAAGAGAAATCGGGCATATGGATGTGCCTTCTGAACAAGATAGCAGACATAAGGACAGTCCTACTCGGAGCTTTGACATGGATATTACATCTGAAGGAATTGGATCTTCTATGGATGCAGCTCCAGAGATCCAGGTTCTGACCTTGTCACCTGAAGCTGAAGGTGCTTCATCAAGCTCTTCATCCTGTCAAAGTGTTGAAGATCCTGTCAACATGAGAAACAGAATTGAGCACCCCAATACTGAATCTGTGCATGAGCAGTTTTTCCGGGAGGAAGTCACCAATCCAGCAAGCACCATCTCCCAACCTGCGGTGCAAGATAAATTTGAAGAGTACCGTTTTGCTGATCTTGTAAGATCGTCTTGGGATGTCTCAGATCATGTAAGCGAAATTATGCAGGCCTTCAGCCTGAAATGGGATGAACTGGCGATGAAGTGGCGGTCACCACACCAACTGCTGGATCCTTACACCTTTGATGAACTAAAGGGGTTAACTAACCAACTAGCAGGAAGTGAAGTCTTGTTTGACTGTGTCAAAGAAGTCTTCATGGAGATGTACCAGAACTTGTGTAGACTCCCGCCTCAAATTTCAAGAATAGAACCAGACGTCCAAGCATATGTGGTGAAAAAAATAACGGTAAATGAGGTTACAGAAATTATGAACTTGCATCACCAGCACCCATCACCAAGCACCCTAGAGCAGCTTGCTGAAAAGGACTTGGCAAGACGTGGATCATGGCTCAATGCTCGACAAATTAATATTGAAGATATTGTAATTGAGGTGGAAGAAGATGTTCTCTTAAAACTGATGTTGGAAATTGTATATGAGATGGATATAAGACAAACTACGTTACTCGCGTGA 2334 0.4237 MVETGCSWRLYRIFNFREAQAKRRLVSNSNRRHSNIHAIGKRLRVVPFYFSKRLGNGNSRSRPDVLAVVDEKHPHIDESSKGARDYGCKSISCVKVADRGNEATKMVVDQKFINGKYLCKDGAGSQSNQFFDALQILYSNKELFLKLLQDPNSLLAKQIYDLQNSQYQERQKRVTRSAYESGWNNSRKSNARQCGNPSKSSDRYILSCDPQSSDGIDTGRQCPLHSHNRFSYNAQTAKPSHFPFSRMKRKLRHAMGVRKKEQQWGTIDGVSHKFPCGCQGLEDGDKVLGMEESVGRNSPSGDHSRFAKGGKLSLDLKKRDKMIKIKDCTLCIGQEAVSVGESCGRNMNRTSVCPSEQNIQKMHVEARKNLSEMLNCRHEERKQWTHTQGRTFPLPRFESVPGSFGRDRRHPSVTEGMGCFPNKHHMVPGNKLWLQKEENSCFGSLGQNINEPPGAIVGSTIRKSPPDNNLHEDYKIPRGSEKLIKSSYDLHTREIGHMDVPSEQDSRHKDSPTRSFDMDITSEGIGSSMDAAPEIQVLTLSPEAEGASSSSSSCQSVEDPVNMRNRIEHPNTESVHEQFFREEVTNPASTISQPAVQDKFEEYRFADLVRSSWDVSDHVSEIMQAFSLKWDELAMKWRSPHQLLDPYTFDELKGLTNQLAGSEVLFDCVKEVFMEMYQNLCRLPPQISRIEPDVQAYVVKKITVNEVTEIMNLHHQHPSPSTLEQLAEKDLARRGSWLNARQINIEDIVIEVEEDVLLKLMLEIVYEMDIRQTTLLA 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g2087 777 MobiDBLite consensus disorder prediction 495 519 - -
Glsi05g2087 777 Pfam Protein of unknown function (DUF3741) 109 153 IPR022212 -
Glsi05g2087 777 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 98 768 - -
Glsi05g2087 777 MobiDBLite consensus disorder prediction 180 202 - -
Glsi05g2087 777 Pfam Domain of unknown function (DUF4378) 618 763 IPR025486 -
Glsi05g2087 777 MobiDBLite consensus disorder prediction 392 417 - -
Glsi05g2087 777 MobiDBLite consensus disorder prediction 495 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g2087 Glsi-ChrGlsi05 67519182 67522417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g2087 518 765 TRM (TON1 Recruiting Motif) Superfamily AT2G45900 29.818 1.83e-14 75.5