Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g2084 ATGCCTGAAGGTAACCAGCTGGCATCTCTGGTGAAATGGATAAATAGTATGCTTCCTCACTTGAATCTTCCTTTAGAAACTTCAGAGGAGGAATTGAGAGCGTTGTTGAGTGATGGATCTGCATTATGCATCATTTTGGACAAGCTAGTTCCTGGTTCAGTCGAAATTGGAAGTGATTCTCCCAGTGAGCAAGGGGATGTTAAAATTTTTTTGGCAGCCATGGATGAATTGGGATTACCTGGATTTAAATTGTCAGACCTAGAGCAGGGATCTATGGTGCCTGTGTTGCAGTGCCTTGAGACTATGAAAACTCATTTTGCTTTTAATGTTGGGCAAGAAGATATCCGAAGTTCTTCCAGAAAGAGGTGGGACCAGCCAGATGTAGCATCCTTAAAGGAAACCTATTACTGCCACAAGGATGTTTCAAAATTTAGAGATTCATTTGGAAATAAAGAGAGACTAAAAATTTCAGTTGATTCAAAATTCCAACATTCTATCAATGGTTCTGTCTTATCAGGTGCTTCTATACATCATATTGGGTATAAGTCTAATGAACTGTTCCAGTTTAATGGAGGACTGCATGTGGATCTTTTGCATGCTAAAATTATGGAATTACCAAAATCAAACAGTTTGGATAGTGCCTCAATTCAATCACTTTTCAACATAGGAAATAGGATTCTGGGCGATATCTTTGAAAGAATGAATGGAGATGTACCTCATCAAAACAATCTTCTCAAGGCTTGTGAGGGGAAGTACCAATCAAGAATAAATGCACTCGAAACCCTCGTGGTAGGGACAACTGAGGAGAACAAGCTTGAGAAAACTAAATTGGAGGAGAGGAAGAAACTTGAAGAGCAGGATGTTGCTCGAGTAAAGAGAGACAAAGTTCGTACTGAAATTGAGATTTCGACACTGAAGCAAGAATTGAAAACAGCTAAATGGGCACATGAAGAGCATTGTTTGCAGATAGAATTGCATGCTAATGAATCTAAAGCTCATTATGAGAAGAGGATAGCAGAACTTGAGTGTCATCTTGCTAATTCAAGGAAGCAAGTAAAGGAACTGGAGGCCTTTTCGGAGTGCAGATCTTTGAAATGGAAGGATAAGGAGCATACCTATCAGAGCTTCATAAATGACCAATTTGGAGCTTTCCAGGAGTTAAGAGCTGCAATGCAATCTGTAAAACAAGAAGTATTAAAAACAAAGAGAAGCTACTCTGAGGAATTCAAGTATTTGGGAATGAAGCTCAAAGATCTAGCTAAAGCTGCTGAAAATTATCATGAAGTTCTTACAGAAAATCGAAAATTGTATAATGAAGTTCAAGATTTGAAAGGAAATATTAGAGTATATTGTCGAATCAGACCATTTCTTCCGGGGCAAAGCCAAAACCATACAACGATTGAGTTTGTTGGTGATAATGGTGAATTAATAGTTAACAATCCTCTCAAACAAGGGAAAGAAAATCCTAAGCTTTTTAAATTTAACAAGGTGTTTGGTCCAGCAGCAAGTCAAGAGGAAGTATTCATGGACACCCAACCGCTAATTCGTTCCGTACTTGATGGTTACAATGTTTGTATATTTGCTTATGGACAAACTGGTTCGGGAAAGACATACACGATGAGTGGACCTAGCTTATCATCAAAATCAGATTGGGGAGTCAACTATCGGGCACTTCATGATCTTTTCCAAATCTCCCAGAGCAGGAGAGGCTCTATTGTTTACGAAGTTGGTATTCAGATGGTTGAGATTTATAACGAACAAGTTCGTGATTTATTATCAAGCAACGGTCCTCAGAAGAGATATCCTTTCCTTTTTGTTATTTTGCATATTGATCATTCAATAAAGTTATACAACTCTGTTTGTACGAAAAATAGATTAAGTAGGGTTTCCCTTGACCTGCACACACTAGGGATTTGGAATACTACTCAACCAAATGGGTTGGCGGTCCCTGATGCAAGCATGCATTCTGTGGATTCAATGACGGATGTCTTGGTGTTGATGAATATTGGGCTAATGAACCGGGCAACCAGTGCCACAGCTTTAAATGAAAGAAGTAGCAGATCACATAGTGTTCTCACTGTTCATGTTCGTGGCACCGATTTGGAGACCAACACTCTGTTGCGTGGTTGTCTGCATCTTGTAGATCTTGCAGGAAGTGAAAGAGTGGACCGTTCTGAAGCAACGGGAAATAGGCTTAAGGAGGCACAACATATAAATAAATCACTGTCAGCATTGGGAGATGTGATCTTCGCTCTGGCACAAAAGAGTCCACATGTGCCATATAGAAATAGTAAATTAACTCAACTTCTTCAGAGTTCATTAGGTGGCCAAGCAAAATCCCTTATGTTTGTGCAGCTTAATCCTGATGTTGCTTCATATTCTGAAACAATAAGCACATTGAAGTTTGCTAAGAGGGTTTCTGGTGTTGAGTTAGGTGCTGCTCGTAGCAACAAAGAGGGGAAAGATGTCAGAGAACTCATGGAGCAGTTGACGTCTTTGAAAGATACAATTGCAAGAAAGGATGAAGAGATTGAGCGGTTGCAGCTGCTCAAGGAAAACGTCTATGTCGCAAAGCGTGGTATGATCTCAGTAAGGCGTGGGTCATCATCTCCTAGGAGACAACCCGTAGGGACTCCCCAACATAGCCAAAAACTTTCAGGAGCAAGGGGGTTTGGAGTTGGTGAAAAAGCAGCTTCTGACATGGATAACTGCTCAGAGTCAGAGTACAGTGATAAGCAATTAGAACCGGGTTTTCATCAATCAAGGGTTGATTTCAGGAACAGTTCGGGTTCCCTACAGTTAAAATTAGCCAGAGAAGATACCAGTCAGAATTTCAATGAGGTCGTTCAACTGTTGGGAATTGGAGATGCAAATTCTGAGGAAAGATTAAGTGACATATCTGATGGTGATCTTTCAATGGGAACAGAAACAGATGGTTCAATCAGCAGTATTGTGGAGCACACTGTTTTCCCTGAAGTGGAGAAACCAGCTGAACTTACACCAACTAAGAACACAACAGAGAAGATTGCAGCTGAGAACACGGGGAAATTTGGATTTATAATGCCGTCCAAAATTTCCAAAGCCCCGCAAGTCCCGCAAAATGTGCAGATAAAATCTTCGAGGTTGTCATTGAACAGAAGCTCATCAAAGGTTTTCTCAAGTGTTAGGAGAACCACAGCCGGTGGCTCTTCTTCGTTAAAGCCCATTAAACGATGA 3216 0.4045 MPEGNQLASLVKWINSMLPHLNLPLETSEEELRALLSDGSALCIILDKLVPGSVEIGSDSPSEQGDVKIFLAAMDELGLPGFKLSDLEQGSMVPVLQCLETMKTHFAFNVGQEDIRSSSRKRWDQPDVASLKETYYCHKDVSKFRDSFGNKERLKISVDSKFQHSINGSVLSGASIHHIGYKSNELFQFNGGLHVDLLHAKIMELPKSNSLDSASIQSLFNIGNRILGDIFERMNGDVPHQNNLLKACEGKYQSRINALETLVVGTTEENKLEKTKLEERKKLEEQDVARVKRDKVRTEIEISTLKQELKTAKWAHEEHCLQIELHANESKAHYEKRIAELECHLANSRKQVKELEAFSECRSLKWKDKEHTYQSFINDQFGAFQELRAAMQSVKQEVLKTKRSYSEEFKYLGMKLKDLAKAAENYHEVLTENRKLYNEVQDLKGNIRVYCRIRPFLPGQSQNHTTIEFVGDNGELIVNNPLKQGKENPKLFKFNKVFGPAASQEEVFMDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPSLSSKSDWGVNYRALHDLFQISQSRRGSIVYEVGIQMVEIYNEQVRDLLSSNGPQKRYPFLFVILHIDHSIKLYNSVCTKNRLSRVSLDLHTLGIWNTTQPNGLAVPDASMHSVDSMTDVLVLMNIGLMNRATSATALNERSSRSHSVLTVHVRGTDLETNTLLRGCLHLVDLAGSERVDRSEATGNRLKEAQHINKSLSALGDVIFALAQKSPHVPYRNSKLTQLLQSSLGGQAKSLMFVQLNPDVASYSETISTLKFAKRVSGVELGAARSNKEGKDVRELMEQLTSLKDTIARKDEEIERLQLLKENVYVAKRGMISVRRGSSSPRRQPVGTPQHSQKLSGARGFGVGEKAASDMDNCSESEYSDKQLEPGFHQSRVDFRNSSGSLQLKLAREDTSQNFNEVVQLLGIGDANSEERLSDISDGDLSMGTETDGSISSIVEHTVFPEVEKPAELTPTKNTTEKIAAENTGKFGFIMPSKISKAPQVPQNVQIKSSRLSLNRSSSKVFSSVRRTTAGGSSSLKPIKR 1071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g2084 1071 MobiDBLite consensus disorder prediction 1048 1065 - -
Glsi05g2084 1071 Gene3D Kinesin motor domain 388 811 IPR036961 -
Glsi05g2084 1071 Coils Coil 419 439 - -
Glsi05g2084 1071 SUPERFAMILY Calponin-homology domain, CH-domain 8 105 IPR036872 -
Glsi05g2084 1071 Coils Coil 274 308 - -
Glsi05g2084 1071 FunFam Kinesin-related protein3 646 851 - -
Glsi05g2084 1071 Pfam Kinesin motor domain 452 807 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi05g2084 1071 SMART ch_5 6 102 IPR001715 GO:0005515
Glsi05g2084 1071 SMART kinesin_4 444 817 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi05g2084 1071 MobiDBLite consensus disorder prediction 901 918 - -
Glsi05g2084 1071 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein with CH (Calponin Homology) domain 388 601 - -
Glsi05g2084 1071 ProSiteProfiles Calponin homology (CH) domain profile. 4 107 IPR001715 GO:0005515
Glsi05g2084 1071 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 446 847 IPR027417 -
Glsi05g2084 1071 PRINTS Kinesin heavy chain signature 521 542 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi05g2084 1071 PRINTS Kinesin heavy chain signature 759 780 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi05g2084 1071 PRINTS Kinesin heavy chain signature 679 696 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi05g2084 1071 PRINTS Kinesin heavy chain signature 710 728 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi05g2084 1071 MobiDBLite consensus disorder prediction 1048 1071 - -
Glsi05g2084 1071 MobiDBLite consensus disorder prediction 867 885 - -
Glsi05g2084 1071 Coils Coil 331 358 - -
Glsi05g2084 1071 ProSiteProfiles Kinesin motor domain profile. 446 809 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi05g2084 1071 Coils Coil 823 853 - -
Glsi05g2084 1071 MobiDBLite consensus disorder prediction 864 918 - -
Glsi05g2084 1071 Gene3D - 4 107 IPR036872 -
Glsi05g2084 1071 PANTHER KINESIN-LIKE PROTEIN KLP-3 11 1022 IPR027640 GO:0003777|GO:0007018
Glsi05g2084 1071 Pfam Calponin homology (CH) domain 9 106 IPR001715 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g2084 Glsi-ChrGlsi05 67495518 67502804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g2084 412 809 Calmodulin-binding Proteins AT5G65930 37.717 4.22e-68 248